Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03692 and MPMX20_03693 are separated by 12 nucleotides MPMX20_03693 and MPMX20_03694 are separated by 749 nucleotides
MPMX20_03692: MPMX20_03692 - Phosphoenolpyruvate-dependent phosphotransferase system, at 3,890,584 to 3,892,830
_03692
MPMX20_03693: MPMX20_03693 - RNA pyrophosphohydrolase, at 3,892,843 to 3,893,307
_03693
MPMX20_03694: MPMX20_03694 - DNA mismatch repair protein MutH, at 3,894,057 to 3,894,749
_03694
Position (kb)
3892
3893
3894 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3891.849 kb on - strand, within MPMX20_03692 at 3891.924 kb on + strand, within MPMX20_03692 at 3891.924 kb on + strand, within MPMX20_03692 at 3891.924 kb on + strand, within MPMX20_03692 at 3891.924 kb on + strand, within MPMX20_03692 at 3891.978 kb on - strand, within MPMX20_03692 at 3892.024 kb on + strand, within MPMX20_03692 at 3892.074 kb on - strand, within MPMX20_03692 at 3892.082 kb on + strand, within MPMX20_03692 at 3892.082 kb on + strand, within MPMX20_03692 at 3892.212 kb on + strand, within MPMX20_03692 at 3892.224 kb on + strand, within MPMX20_03692 at 3892.233 kb on - strand, within MPMX20_03692 at 3892.255 kb on + strand, within MPMX20_03692 at 3892.270 kb on + strand, within MPMX20_03692 at 3892.278 kb on - strand, within MPMX20_03692 at 3892.303 kb on + strand, within MPMX20_03692 at 3892.347 kb on - strand, within MPMX20_03692 at 3892.411 kb on - strand, within MPMX20_03692 at 3892.529 kb on - strand, within MPMX20_03692 at 3892.539 kb on + strand, within MPMX20_03692 at 3892.581 kb on - strand, within MPMX20_03692 at 3892.581 kb on - strand, within MPMX20_03692 at 3892.610 kb on - strand at 3892.677 kb on + strand at 3892.762 kb on + strand at 3892.790 kb on + strand at 3892.839 kb on - strand at 3892.849 kb on - strand at 3892.895 kb on + strand, within MPMX20_03693 at 3892.947 kb on - strand, within MPMX20_03693 at 3892.995 kb on + strand, within MPMX20_03693 at 3893.214 kb on + strand, within MPMX20_03693 at 3893.386 kb on + strand at 3893.386 kb on + strand at 3893.386 kb on + strand at 3893.421 kb on + strand at 3893.425 kb on - strand at 3893.425 kb on - strand at 3893.429 kb on - strand at 3893.475 kb on - strand at 3893.514 kb on + strand at 3893.802 kb on + strand at 3893.802 kb on + strand at 3893.802 kb on + strand at 3893.810 kb on - strand at 3893.810 kb on - strand at 3893.810 kb on - strand at 3893.983 kb on - strand at 3894.073 kb on - strand at 3894.231 kb on - strand, within MPMX20_03694 at 3894.232 kb on - strand, within MPMX20_03694 at 3894.242 kb on - strand, within MPMX20_03694 at 3894.248 kb on + strand, within MPMX20_03694 at 3894.256 kb on - strand, within MPMX20_03694 at 3894.287 kb on + strand, within MPMX20_03694
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 3,891,849 - MPMX20_03692 0.56 +1.8 3,891,924 + MPMX20_03692 0.60 +0.2 3,891,924 + MPMX20_03692 0.60 -1.5 3,891,924 + MPMX20_03692 0.60 -3.2 3,891,924 + MPMX20_03692 0.60 -0.1 3,891,978 - MPMX20_03692 0.62 -1.8 3,892,024 + MPMX20_03692 0.64 +0.4 3,892,074 - MPMX20_03692 0.66 -1.8 3,892,082 + MPMX20_03692 0.67 -0.5 3,892,082 + MPMX20_03692 0.67 -1.3 3,892,212 + MPMX20_03692 0.72 -0.1 3,892,224 + MPMX20_03692 0.73 +0.4 3,892,233 - MPMX20_03692 0.73 -0.3 3,892,255 + MPMX20_03692 0.74 +0.0 3,892,270 + MPMX20_03692 0.75 +0.1 3,892,278 - MPMX20_03692 0.75 -0.8 3,892,303 + MPMX20_03692 0.77 -0.5 3,892,347 - MPMX20_03692 0.78 -0.7 3,892,411 - MPMX20_03692 0.81 -1.2 3,892,529 - MPMX20_03692 0.87 -1.1 3,892,539 + MPMX20_03692 0.87 -1.5 3,892,581 - MPMX20_03692 0.89 -0.3 3,892,581 - MPMX20_03692 0.89 -0.6 3,892,610 - +0.1 3,892,677 + -1.4 3,892,762 + -0.5 3,892,790 + -0.9 3,892,839 - +1.9 3,892,849 - -0.1 3,892,895 + MPMX20_03693 0.11 -2.2 3,892,947 - MPMX20_03693 0.22 +1.3 3,892,995 + MPMX20_03693 0.33 -0.3 3,893,214 + MPMX20_03693 0.80 -1.3 3,893,386 + -0.5 3,893,386 + -0.9 3,893,386 + +0.5 3,893,421 + -0.9 3,893,425 - -0.9 3,893,425 - +0.7 3,893,429 - +1.3 3,893,475 - -1.8 3,893,514 + +1.0 3,893,802 + -1.6 3,893,802 + -0.1 3,893,802 + -0.9 3,893,810 - -0.8 3,893,810 - +0.0 3,893,810 - +0.1 3,893,983 - -0.8 3,894,073 - +1.2 3,894,231 - MPMX20_03694 0.25 +0.8 3,894,232 - MPMX20_03694 0.25 -0.5 3,894,242 - MPMX20_03694 0.27 -0.0 3,894,248 + MPMX20_03694 0.28 +1.0 3,894,256 - MPMX20_03694 0.29 +0.2 3,894,287 + MPMX20_03694 0.33 +1.4
Or see this region's nucleotide sequence