Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03633

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03631 and MPMX20_03632 overlap by 4 nucleotidesMPMX20_03632 and MPMX20_03633 overlap by 1 nucleotidesMPMX20_03633 and MPMX20_03634 are separated by 19 nucleotidesMPMX20_03634 and MPMX20_03635 are separated by 166 nucleotidesMPMX20_03635 and MPMX20_03636 are separated by 58 nucleotides MPMX20_03631: MPMX20_03631 - tRNA pseudouridine synthase D, at 3,819,967 to 3,821,016 _03631 MPMX20_03632: MPMX20_03632 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 3,821,013 to 3,821,492 _03632 MPMX20_03633: MPMX20_03633 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 3,821,492 to 3,822,202 _03633 MPMX20_03634: MPMX20_03634 - Cell division protein FtsB, at 3,822,222 to 3,822,533 _03634 MPMX20_03635: MPMX20_03635 - Inner membrane protein YgbE, at 3,822,700 to 3,823,026 _03635 MPMX20_03636: MPMX20_03636 - Adenylyl-sulfate kinase, at 3,823,085 to 3,823,690 _03636 Position (kb) 3821 3822 3823Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3820.501 kb on - strand, within MPMX20_03631at 3820.686 kb on - strand, within MPMX20_03631at 3820.752 kb on + strand, within MPMX20_03631at 3820.913 kb on + strandat 3820.960 kb on - strandat 3820.977 kb on - strandat 3821.012 kb on + strandat 3821.498 kb on - strandat 3821.501 kb on + strandat 3821.509 kb on - strandat 3821.509 kb on - strandat 3821.518 kb on - strandat 3822.246 kb on - strandat 3822.246 kb on - strandat 3822.598 kb on - strandat 3822.610 kb on - strandat 3822.653 kb on + strandat 3822.653 kb on + strandat 3822.733 kb on + strand, within MPMX20_03635at 3822.801 kb on + strand, within MPMX20_03635at 3822.801 kb on + strand, within MPMX20_03635at 3822.801 kb on + strand, within MPMX20_03635at 3822.804 kb on - strand, within MPMX20_03635at 3822.814 kb on - strand, within MPMX20_03635at 3822.861 kb on - strand, within MPMX20_03635at 3822.871 kb on - strand, within MPMX20_03635at 3822.873 kb on + strand, within MPMX20_03635at 3822.873 kb on + strand, within MPMX20_03635at 3822.992 kb on - strand, within MPMX20_03635at 3823.018 kb on + strandat 3823.018 kb on + strandat 3823.062 kb on + strandat 3823.084 kb on + strandat 3823.107 kb on + strandat 3823.112 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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3,820,501 - MPMX20_03631 0.51 +0.8
3,820,686 - MPMX20_03631 0.68 -1.8
3,820,752 + MPMX20_03631 0.75 +0.0
3,820,913 + +0.1
3,820,960 - -1.7
3,820,977 - +1.7
3,821,012 + -0.4
3,821,498 - +0.7
3,821,501 + -2.4
3,821,509 - -3.0
3,821,509 - -0.8
3,821,518 - +0.7
3,822,246 - -2.1
3,822,246 - -0.4
3,822,598 - +0.2
3,822,610 - +0.8
3,822,653 + +0.6
3,822,653 + +1.9
3,822,733 + MPMX20_03635 0.10 -0.2
3,822,801 + MPMX20_03635 0.31 +0.2
3,822,801 + MPMX20_03635 0.31 -0.4
3,822,801 + MPMX20_03635 0.31 -0.2
3,822,804 - MPMX20_03635 0.32 -1.2
3,822,814 - MPMX20_03635 0.35 -2.6
3,822,861 - MPMX20_03635 0.49 -0.0
3,822,871 - MPMX20_03635 0.52 -1.3
3,822,873 + MPMX20_03635 0.53 -0.7
3,822,873 + MPMX20_03635 0.53 -1.4
3,822,992 - MPMX20_03635 0.89 +0.2
3,823,018 + +0.4
3,823,018 + -1.9
3,823,062 + -0.8
3,823,084 + +0.1
3,823,107 + -1.6
3,823,112 + +0.8

Or see this region's nucleotide sequence