Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03631 and MPMX20_03632 overlap by 4 nucleotides MPMX20_03632 and MPMX20_03633 overlap by 1 nucleotides MPMX20_03633 and MPMX20_03634 are separated by 19 nucleotides MPMX20_03634 and MPMX20_03635 are separated by 166 nucleotides MPMX20_03635 and MPMX20_03636 are separated by 58 nucleotides
MPMX20_03631: MPMX20_03631 - tRNA pseudouridine synthase D, at 3,819,967 to 3,821,016
_03631
MPMX20_03632: MPMX20_03632 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 3,821,013 to 3,821,492
_03632
MPMX20_03633: MPMX20_03633 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 3,821,492 to 3,822,202
_03633
MPMX20_03634: MPMX20_03634 - Cell division protein FtsB, at 3,822,222 to 3,822,533
_03634
MPMX20_03635: MPMX20_03635 - Inner membrane protein YgbE, at 3,822,700 to 3,823,026
_03635
MPMX20_03636: MPMX20_03636 - Adenylyl-sulfate kinase, at 3,823,085 to 3,823,690
_03636
Position (kb)
3821
3822
3823 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3820.501 kb on - strand, within MPMX20_03631 at 3820.686 kb on - strand, within MPMX20_03631 at 3820.752 kb on + strand, within MPMX20_03631 at 3820.913 kb on + strand at 3820.960 kb on - strand at 3820.977 kb on - strand at 3821.012 kb on + strand at 3821.498 kb on - strand at 3821.501 kb on + strand at 3821.509 kb on - strand at 3821.509 kb on - strand at 3821.518 kb on - strand at 3822.246 kb on - strand at 3822.246 kb on - strand at 3822.598 kb on - strand at 3822.610 kb on - strand at 3822.653 kb on + strand at 3822.653 kb on + strand at 3822.733 kb on + strand, within MPMX20_03635 at 3822.801 kb on + strand, within MPMX20_03635 at 3822.801 kb on + strand, within MPMX20_03635 at 3822.801 kb on + strand, within MPMX20_03635 at 3822.804 kb on - strand, within MPMX20_03635 at 3822.814 kb on - strand, within MPMX20_03635 at 3822.861 kb on - strand, within MPMX20_03635 at 3822.871 kb on - strand, within MPMX20_03635 at 3822.873 kb on + strand, within MPMX20_03635 at 3822.873 kb on + strand, within MPMX20_03635 at 3822.992 kb on - strand, within MPMX20_03635 at 3823.018 kb on + strand at 3823.018 kb on + strand at 3823.062 kb on + strand at 3823.084 kb on + strand at 3823.107 kb on + strand at 3823.112 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 3,820,501 - MPMX20_03631 0.51 +0.8 3,820,686 - MPMX20_03631 0.68 -1.8 3,820,752 + MPMX20_03631 0.75 +0.0 3,820,913 + +0.1 3,820,960 - -1.7 3,820,977 - +1.7 3,821,012 + -0.4 3,821,498 - +0.7 3,821,501 + -2.4 3,821,509 - -3.0 3,821,509 - -0.8 3,821,518 - +0.7 3,822,246 - -2.1 3,822,246 - -0.4 3,822,598 - +0.2 3,822,610 - +0.8 3,822,653 + +0.6 3,822,653 + +1.9 3,822,733 + MPMX20_03635 0.10 -0.2 3,822,801 + MPMX20_03635 0.31 +0.2 3,822,801 + MPMX20_03635 0.31 -0.4 3,822,801 + MPMX20_03635 0.31 -0.2 3,822,804 - MPMX20_03635 0.32 -1.2 3,822,814 - MPMX20_03635 0.35 -2.6 3,822,861 - MPMX20_03635 0.49 -0.0 3,822,871 - MPMX20_03635 0.52 -1.3 3,822,873 + MPMX20_03635 0.53 -0.7 3,822,873 + MPMX20_03635 0.53 -1.4 3,822,992 - MPMX20_03635 0.89 +0.2 3,823,018 + +0.4 3,823,018 + -1.9 3,823,062 + -0.8 3,823,084 + +0.1 3,823,107 + -1.6 3,823,112 + +0.8
Or see this region's nucleotide sequence