Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03388 and MPMX20_03389 are separated by 300 nucleotides MPMX20_03389 and MPMX20_03390 are separated by 112 nucleotides
MPMX20_03388: MPMX20_03388 - Di-/tripeptide transporter, at 3,567,036 to 3,568,577
_03388
MPMX20_03389: MPMX20_03389 - GTPase Der, at 3,568,878 to 3,570,350
_03389
MPMX20_03390: MPMX20_03390 - Outer membrane protein assembly factor BamB, at 3,570,463 to 3,571,641
_03390
Position (kb)
3568
3569
3570
3571 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3567.912 kb on + strand, within MPMX20_03388 at 3567.984 kb on + strand, within MPMX20_03388 at 3567.996 kb on - strand, within MPMX20_03388 at 3568.025 kb on + strand, within MPMX20_03388 at 3568.050 kb on - strand, within MPMX20_03388 at 3568.177 kb on - strand, within MPMX20_03388 at 3568.185 kb on - strand, within MPMX20_03388 at 3568.185 kb on - strand, within MPMX20_03388 at 3568.185 kb on - strand, within MPMX20_03388 at 3568.185 kb on - strand, within MPMX20_03388 at 3568.185 kb on - strand, within MPMX20_03388 at 3568.187 kb on + strand, within MPMX20_03388 at 3568.195 kb on - strand, within MPMX20_03388 at 3568.195 kb on - strand, within MPMX20_03388 at 3568.283 kb on + strand, within MPMX20_03388 at 3568.291 kb on - strand, within MPMX20_03388 at 3568.301 kb on - strand, within MPMX20_03388 at 3568.366 kb on - strand, within MPMX20_03388 at 3568.433 kb on - strand at 3568.509 kb on - strand at 3568.592 kb on + strand at 3568.600 kb on - strand at 3568.600 kb on - strand at 3568.605 kb on - strand at 3568.719 kb on - strand at 3568.726 kb on - strand at 3568.763 kb on + strand at 3570.460 kb on - strand at 3570.485 kb on - strand at 3570.543 kb on + strand at 3570.551 kb on - strand at 3570.591 kb on + strand, within MPMX20_03390 at 3570.591 kb on + strand, within MPMX20_03390 at 3570.612 kb on - strand, within MPMX20_03390 at 3570.612 kb on - strand, within MPMX20_03390 at 3570.612 kb on - strand, within MPMX20_03390 at 3570.612 kb on - strand, within MPMX20_03390 at 3570.612 kb on - strand, within MPMX20_03390 at 3570.627 kb on + strand, within MPMX20_03390 at 3570.627 kb on + strand, within MPMX20_03390 at 3570.648 kb on + strand, within MPMX20_03390 at 3570.696 kb on + strand, within MPMX20_03390 at 3570.704 kb on - strand, within MPMX20_03390 at 3570.704 kb on - strand, within MPMX20_03390 at 3570.704 kb on - strand, within MPMX20_03390 at 3570.780 kb on + strand, within MPMX20_03390 at 3570.836 kb on - strand, within MPMX20_03390 at 3571.073 kb on + strand, within MPMX20_03390 at 3571.158 kb on - strand, within MPMX20_03390 at 3571.163 kb on - strand, within MPMX20_03390 at 3571.257 kb on - strand, within MPMX20_03390 at 3571.325 kb on + strand, within MPMX20_03390
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 3,567,912 + MPMX20_03388 0.57 +0.2 3,567,984 + MPMX20_03388 0.61 +0.1 3,567,996 - MPMX20_03388 0.62 -1.2 3,568,025 + MPMX20_03388 0.64 -0.5 3,568,050 - MPMX20_03388 0.66 +0.8 3,568,177 - MPMX20_03388 0.74 +0.4 3,568,185 - MPMX20_03388 0.75 +1.6 3,568,185 - MPMX20_03388 0.75 +0.8 3,568,185 - MPMX20_03388 0.75 +0.6 3,568,185 - MPMX20_03388 0.75 +0.5 3,568,185 - MPMX20_03388 0.75 +0.3 3,568,187 + MPMX20_03388 0.75 +0.5 3,568,195 - MPMX20_03388 0.75 -0.4 3,568,195 - MPMX20_03388 0.75 +0.8 3,568,283 + MPMX20_03388 0.81 -2.3 3,568,291 - MPMX20_03388 0.81 -0.7 3,568,301 - MPMX20_03388 0.82 -1.5 3,568,366 - MPMX20_03388 0.86 -3.0 3,568,433 - +1.0 3,568,509 - -1.4 3,568,592 + +0.3 3,568,600 - -0.1 3,568,600 - -1.6 3,568,605 - +1.2 3,568,719 - -0.7 3,568,726 - +3.0 3,568,763 + -1.3 3,570,460 - -1.5 3,570,485 - +1.7 3,570,543 + -0.1 3,570,551 - -0.7 3,570,591 + MPMX20_03390 0.11 -1.0 3,570,591 + MPMX20_03390 0.11 -0.3 3,570,612 - MPMX20_03390 0.13 -0.5 3,570,612 - MPMX20_03390 0.13 -2.2 3,570,612 - MPMX20_03390 0.13 -1.0 3,570,612 - MPMX20_03390 0.13 -1.0 3,570,612 - MPMX20_03390 0.13 -2.5 3,570,627 + MPMX20_03390 0.14 -1.3 3,570,627 + MPMX20_03390 0.14 -1.7 3,570,648 + MPMX20_03390 0.16 -1.7 3,570,696 + MPMX20_03390 0.20 -2.3 3,570,704 - MPMX20_03390 0.20 -0.2 3,570,704 - MPMX20_03390 0.20 -1.9 3,570,704 - MPMX20_03390 0.20 -1.0 3,570,780 + MPMX20_03390 0.27 -1.2 3,570,836 - MPMX20_03390 0.32 -0.1 3,571,073 + MPMX20_03390 0.52 -3.2 3,571,158 - MPMX20_03390 0.59 -0.4 3,571,163 - MPMX20_03390 0.59 -2.0 3,571,257 - MPMX20_03390 0.67 -1.8 3,571,325 + MPMX20_03390 0.73 -1.0
Or see this region's nucleotide sequence