Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03389

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03388 and MPMX20_03389 are separated by 300 nucleotidesMPMX20_03389 and MPMX20_03390 are separated by 112 nucleotides MPMX20_03388: MPMX20_03388 - Di-/tripeptide transporter, at 3,567,036 to 3,568,577 _03388 MPMX20_03389: MPMX20_03389 - GTPase Der, at 3,568,878 to 3,570,350 _03389 MPMX20_03390: MPMX20_03390 - Outer membrane protein assembly factor BamB, at 3,570,463 to 3,571,641 _03390 Position (kb) 3568 3569 3570 3571Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3567.912 kb on + strand, within MPMX20_03388at 3567.984 kb on + strand, within MPMX20_03388at 3567.996 kb on - strand, within MPMX20_03388at 3568.025 kb on + strand, within MPMX20_03388at 3568.050 kb on - strand, within MPMX20_03388at 3568.177 kb on - strand, within MPMX20_03388at 3568.185 kb on - strand, within MPMX20_03388at 3568.185 kb on - strand, within MPMX20_03388at 3568.185 kb on - strand, within MPMX20_03388at 3568.185 kb on - strand, within MPMX20_03388at 3568.185 kb on - strand, within MPMX20_03388at 3568.187 kb on + strand, within MPMX20_03388at 3568.195 kb on - strand, within MPMX20_03388at 3568.195 kb on - strand, within MPMX20_03388at 3568.283 kb on + strand, within MPMX20_03388at 3568.291 kb on - strand, within MPMX20_03388at 3568.301 kb on - strand, within MPMX20_03388at 3568.366 kb on - strand, within MPMX20_03388at 3568.433 kb on - strandat 3568.509 kb on - strandat 3568.592 kb on + strandat 3568.600 kb on - strandat 3568.600 kb on - strandat 3568.605 kb on - strandat 3568.719 kb on - strandat 3568.726 kb on - strandat 3568.763 kb on + strandat 3570.460 kb on - strandat 3570.485 kb on - strandat 3570.543 kb on + strandat 3570.551 kb on - strandat 3570.591 kb on + strand, within MPMX20_03390at 3570.591 kb on + strand, within MPMX20_03390at 3570.612 kb on - strand, within MPMX20_03390at 3570.612 kb on - strand, within MPMX20_03390at 3570.612 kb on - strand, within MPMX20_03390at 3570.612 kb on - strand, within MPMX20_03390at 3570.612 kb on - strand, within MPMX20_03390at 3570.627 kb on + strand, within MPMX20_03390at 3570.627 kb on + strand, within MPMX20_03390at 3570.648 kb on + strand, within MPMX20_03390at 3570.696 kb on + strand, within MPMX20_03390at 3570.704 kb on - strand, within MPMX20_03390at 3570.704 kb on - strand, within MPMX20_03390at 3570.704 kb on - strand, within MPMX20_03390at 3570.780 kb on + strand, within MPMX20_03390at 3570.836 kb on - strand, within MPMX20_03390at 3571.073 kb on + strand, within MPMX20_03390at 3571.158 kb on - strand, within MPMX20_03390at 3571.163 kb on - strand, within MPMX20_03390at 3571.257 kb on - strand, within MPMX20_03390at 3571.325 kb on + strand, within MPMX20_03390

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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3,567,912 + MPMX20_03388 0.57 +0.2
3,567,984 + MPMX20_03388 0.61 +0.1
3,567,996 - MPMX20_03388 0.62 -1.2
3,568,025 + MPMX20_03388 0.64 -0.5
3,568,050 - MPMX20_03388 0.66 +0.8
3,568,177 - MPMX20_03388 0.74 +0.4
3,568,185 - MPMX20_03388 0.75 +1.6
3,568,185 - MPMX20_03388 0.75 +0.8
3,568,185 - MPMX20_03388 0.75 +0.6
3,568,185 - MPMX20_03388 0.75 +0.5
3,568,185 - MPMX20_03388 0.75 +0.3
3,568,187 + MPMX20_03388 0.75 +0.5
3,568,195 - MPMX20_03388 0.75 -0.4
3,568,195 - MPMX20_03388 0.75 +0.8
3,568,283 + MPMX20_03388 0.81 -2.3
3,568,291 - MPMX20_03388 0.81 -0.7
3,568,301 - MPMX20_03388 0.82 -1.5
3,568,366 - MPMX20_03388 0.86 -3.0
3,568,433 - +1.0
3,568,509 - -1.4
3,568,592 + +0.3
3,568,600 - -0.1
3,568,600 - -1.6
3,568,605 - +1.2
3,568,719 - -0.7
3,568,726 - +3.0
3,568,763 + -1.3
3,570,460 - -1.5
3,570,485 - +1.7
3,570,543 + -0.1
3,570,551 - -0.7
3,570,591 + MPMX20_03390 0.11 -1.0
3,570,591 + MPMX20_03390 0.11 -0.3
3,570,612 - MPMX20_03390 0.13 -0.5
3,570,612 - MPMX20_03390 0.13 -2.2
3,570,612 - MPMX20_03390 0.13 -1.0
3,570,612 - MPMX20_03390 0.13 -1.0
3,570,612 - MPMX20_03390 0.13 -2.5
3,570,627 + MPMX20_03390 0.14 -1.3
3,570,627 + MPMX20_03390 0.14 -1.7
3,570,648 + MPMX20_03390 0.16 -1.7
3,570,696 + MPMX20_03390 0.20 -2.3
3,570,704 - MPMX20_03390 0.20 -0.2
3,570,704 - MPMX20_03390 0.20 -1.9
3,570,704 - MPMX20_03390 0.20 -1.0
3,570,780 + MPMX20_03390 0.27 -1.2
3,570,836 - MPMX20_03390 0.32 -0.1
3,571,073 + MPMX20_03390 0.52 -3.2
3,571,158 - MPMX20_03390 0.59 -0.4
3,571,163 - MPMX20_03390 0.59 -2.0
3,571,257 - MPMX20_03390 0.67 -1.8
3,571,325 + MPMX20_03390 0.73 -1.0

Or see this region's nucleotide sequence