Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02638 and MPMX20_02639 overlap by 4 nucleotides MPMX20_02639 and MPMX20_02640 are separated by 126 nucleotides MPMX20_02640 and MPMX20_02641 are separated by 124 nucleotides
MPMX20_02638: MPMX20_02638 - Outer-membrane lipoprotein LolB, at 2,781,895 to 2,782,506
_02638
MPMX20_02639: MPMX20_02639 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, at 2,782,503 to 2,783,372
_02639
MPMX20_02640: MPMX20_02640 - Ribose-phosphate pyrophosphokinase, at 2,783,499 to 2,784,446
_02640
MPMX20_02641: MPMX20_02641 - C4-dicarboxylic acid transporter DauA, at 2,784,571 to 2,786,250
_02641
Position (kb)
2783
2784
2785 Strain fitness (log2 ratio)
-2
-1
0
1 at 2784.535 kb on + strand at 2784.536 kb on - strand at 2784.548 kb on - strand at 2784.593 kb on - strand at 2784.596 kb on + strand at 2784.603 kb on - strand at 2784.674 kb on - strand at 2784.694 kb on + strand at 2784.718 kb on - strand at 2784.928 kb on + strand, within MPMX20_02641 at 2784.931 kb on - strand, within MPMX20_02641 at 2784.990 kb on - strand, within MPMX20_02641 at 2785.008 kb on + strand, within MPMX20_02641 at 2785.013 kb on + strand, within MPMX20_02641 at 2785.034 kb on + strand, within MPMX20_02641 at 2785.034 kb on + strand, within MPMX20_02641 at 2785.164 kb on - strand, within MPMX20_02641 at 2785.223 kb on - strand, within MPMX20_02641 at 2785.225 kb on + strand, within MPMX20_02641 at 2785.266 kb on - strand, within MPMX20_02641 at 2785.301 kb on + strand, within MPMX20_02641 at 2785.301 kb on + strand, within MPMX20_02641 at 2785.301 kb on - strand, within MPMX20_02641 at 2785.372 kb on - strand, within MPMX20_02641
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 2,784,535 + -1.9 2,784,536 - +0.2 2,784,548 - -0.0 2,784,593 - +0.9 2,784,596 + -0.1 2,784,603 - +0.6 2,784,674 - -0.6 2,784,694 + -1.0 2,784,718 - +0.1 2,784,928 + MPMX20_02641 0.21 +0.8 2,784,931 - MPMX20_02641 0.21 -1.3 2,784,990 - MPMX20_02641 0.25 +0.4 2,785,008 + MPMX20_02641 0.26 -1.7 2,785,013 + MPMX20_02641 0.26 +0.7 2,785,034 + MPMX20_02641 0.28 +0.7 2,785,034 + MPMX20_02641 0.28 -0.4 2,785,164 - MPMX20_02641 0.35 +0.8 2,785,223 - MPMX20_02641 0.39 -0.3 2,785,225 + MPMX20_02641 0.39 -0.3 2,785,266 - MPMX20_02641 0.41 -0.3 2,785,301 + MPMX20_02641 0.43 +0.7 2,785,301 + MPMX20_02641 0.43 +0.3 2,785,301 - MPMX20_02641 0.43 -1.0 2,785,372 - MPMX20_02641 0.48 +0.9
Or see this region's nucleotide sequence