Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01799

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01797 and MPMX20_01798 overlap by 8 nucleotidesMPMX20_01798 and MPMX20_01799 overlap by 1 nucleotidesMPMX20_01799 and MPMX20_01800 are separated by 54 nucleotidesMPMX20_01800 and MPMX20_01801 are separated by 14 nucleotides MPMX20_01797: MPMX20_01797 - Lipoprotein-releasing system transmembrane protein LolC, at 1,890,417 to 1,891,577 _01797 MPMX20_01798: MPMX20_01798 - Lipoprotein-releasing system ATP-binding protein LolD, at 1,891,570 to 1,892,271 _01798 MPMX20_01799: MPMX20_01799 - Lipoprotein-releasing system transmembrane protein LolE, at 1,892,271 to 1,893,515 _01799 MPMX20_01800: MPMX20_01800 - N-acetyl-D-glucosamine kinase, at 1,893,570 to 1,894,481 _01800 MPMX20_01801: MPMX20_01801 - NAD-dependent protein deacylase, at 1,894,496 to 1,895,317 _01801 Position (kb) 1892 1893 1894Strain fitness (log2 ratio) -1 0 1 2 3at 1893.601 kb on + strandat 1893.735 kb on + strand, within MPMX20_01800at 1893.743 kb on - strand, within MPMX20_01800at 1893.786 kb on + strand, within MPMX20_01800at 1893.842 kb on + strand, within MPMX20_01800at 1893.854 kb on + strand, within MPMX20_01800at 1893.862 kb on - strand, within MPMX20_01800at 1893.902 kb on + strand, within MPMX20_01800at 1893.966 kb on + strand, within MPMX20_01800at 1893.974 kb on - strand, within MPMX20_01800at 1893.974 kb on - strand, within MPMX20_01800at 1894.013 kb on + strand, within MPMX20_01800at 1894.019 kb on + strand, within MPMX20_01800at 1894.086 kb on + strand, within MPMX20_01800at 1894.089 kb on - strand, within MPMX20_01800at 1894.110 kb on + strand, within MPMX20_01800at 1894.255 kb on + strand, within MPMX20_01800at 1894.263 kb on - strand, within MPMX20_01800at 1894.362 kb on - strand, within MPMX20_01800at 1894.446 kb on - strandat 1894.498 kb on - strandat 1894.509 kb on + strandat 1894.514 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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1,893,601 + -0.2
1,893,735 + MPMX20_01800 0.18 +0.1
1,893,743 - MPMX20_01800 0.19 -0.7
1,893,786 + MPMX20_01800 0.24 -1.0
1,893,842 + MPMX20_01800 0.30 +0.4
1,893,854 + MPMX20_01800 0.31 -0.3
1,893,862 - MPMX20_01800 0.32 -0.8
1,893,902 + MPMX20_01800 0.36 -0.2
1,893,966 + MPMX20_01800 0.43 -0.1
1,893,974 - MPMX20_01800 0.44 +0.2
1,893,974 - MPMX20_01800 0.44 +0.7
1,894,013 + MPMX20_01800 0.49 -0.2
1,894,019 + MPMX20_01800 0.49 -0.6
1,894,086 + MPMX20_01800 0.57 +0.4
1,894,089 - MPMX20_01800 0.57 -0.8
1,894,110 + MPMX20_01800 0.59 +0.6
1,894,255 + MPMX20_01800 0.75 +1.6
1,894,263 - MPMX20_01800 0.76 +3.4
1,894,362 - MPMX20_01800 0.87 +0.5
1,894,446 - -1.5
1,894,498 - -0.4
1,894,509 + -1.2
1,894,514 + +0.2

Or see this region's nucleotide sequence