Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01748

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01746 and MPMX20_01747 overlap by 88 nucleotidesMPMX20_01747 and MPMX20_01748 are separated by 54 nucleotidesMPMX20_01748 and MPMX20_01749 are separated by 59 nucleotidesMPMX20_01749 and MPMX20_01750 are separated by 4 nucleotidesMPMX20_01750 and MPMX20_01751 are separated by 93 nucleotides MPMX20_01746: MPMX20_01746 - Putative oxidoreductase YceM, at 1,840,045 to 1,840,968 _01746 MPMX20_01747: MPMX20_01747 - hypothetical protein, at 1,840,881 to 1,841,105 _01747 MPMX20_01748: MPMX20_01748 - putative lipid II flippase MurJ, at 1,841,160 to 1,842,695 _01748 MPMX20_01749: MPMX20_01749 - Flagella synthesis protein FlgN, at 1,842,755 to 1,843,180 _01749 MPMX20_01750: MPMX20_01750 - Negative regulator of flagellin synthesis, at 1,843,185 to 1,843,478 _01750 MPMX20_01751: MPMX20_01751 - Flagella basal body P-ring formation protein FlgA, at 1,843,572 to 1,844,231 _01751 Position (kb) 1841 1842 1843Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1840.184 kb on - strand, within MPMX20_01746at 1840.223 kb on - strand, within MPMX20_01746at 1840.257 kb on - strand, within MPMX20_01746at 1840.284 kb on - strand, within MPMX20_01746at 1840.306 kb on + strand, within MPMX20_01746at 1840.461 kb on + strand, within MPMX20_01746at 1840.474 kb on - strand, within MPMX20_01746at 1840.496 kb on + strand, within MPMX20_01746at 1840.542 kb on + strand, within MPMX20_01746at 1840.629 kb on + strand, within MPMX20_01746at 1840.629 kb on + strand, within MPMX20_01746at 1840.637 kb on - strand, within MPMX20_01746at 1840.738 kb on + strand, within MPMX20_01746at 1840.774 kb on - strand, within MPMX20_01746at 1840.823 kb on + strand, within MPMX20_01746at 1840.823 kb on + strand, within MPMX20_01746at 1840.823 kb on + strand, within MPMX20_01746at 1840.831 kb on - strand, within MPMX20_01746at 1840.911 kb on + strandat 1840.919 kb on - strandat 1840.941 kb on + strandat 1840.941 kb on + strandat 1840.941 kb on + strandat 1840.953 kb on + strandat 1840.961 kb on - strandat 1842.651 kb on + strandat 1842.714 kb on + strandat 1842.732 kb on - strandat 1842.805 kb on + strand, within MPMX20_01749at 1842.818 kb on - strand, within MPMX20_01749at 1842.855 kb on - strand, within MPMX20_01749at 1842.855 kb on - strand, within MPMX20_01749at 1842.879 kb on - strand, within MPMX20_01749at 1842.912 kb on + strand, within MPMX20_01749at 1842.977 kb on + strand, within MPMX20_01749at 1842.992 kb on - strand, within MPMX20_01749at 1842.992 kb on - strand, within MPMX20_01749at 1843.004 kb on - strand, within MPMX20_01749at 1843.004 kb on - strand, within MPMX20_01749at 1843.009 kb on + strand, within MPMX20_01749at 1843.017 kb on - strand, within MPMX20_01749at 1843.022 kb on - strand, within MPMX20_01749at 1843.027 kb on - strand, within MPMX20_01749at 1843.053 kb on + strand, within MPMX20_01749at 1843.082 kb on - strand, within MPMX20_01749at 1843.089 kb on + strand, within MPMX20_01749at 1843.156 kb on - strandat 1843.186 kb on + strandat 1843.186 kb on + strandat 1843.196 kb on + strandat 1843.204 kb on - strandat 1843.352 kb on + strand, within MPMX20_01750at 1843.352 kb on + strand, within MPMX20_01750at 1843.352 kb on + strand, within MPMX20_01750at 1843.352 kb on + strand, within MPMX20_01750at 1843.352 kb on + strand, within MPMX20_01750at 1843.352 kb on + strand, within MPMX20_01750at 1843.352 kb on + strand, within MPMX20_01750at 1843.352 kb on + strand, within MPMX20_01750at 1843.352 kb on + strand, within MPMX20_01750at 1843.352 kb on + strand, within MPMX20_01750at 1843.360 kb on - strand, within MPMX20_01750at 1843.360 kb on - strand, within MPMX20_01750at 1843.360 kb on - strand, within MPMX20_01750at 1843.360 kb on - strand, within MPMX20_01750at 1843.360 kb on - strand, within MPMX20_01750at 1843.360 kb on - strand, within MPMX20_01750at 1843.360 kb on - strand, within MPMX20_01750at 1843.360 kb on - strand, within MPMX20_01750at 1843.360 kb on - strand, within MPMX20_01750at 1843.360 kb on - strand, within MPMX20_01750at 1843.360 kb on - strand, within MPMX20_01750at 1843.428 kb on + strand, within MPMX20_01750at 1843.430 kb on + strand, within MPMX20_01750at 1843.430 kb on + strand, within MPMX20_01750at 1843.430 kb on + strand, within MPMX20_01750at 1843.430 kb on + strand, within MPMX20_01750at 1843.433 kb on + strand, within MPMX20_01750at 1843.436 kb on - strand, within MPMX20_01750at 1843.438 kb on - strand, within MPMX20_01750at 1843.438 kb on - strand, within MPMX20_01750at 1843.438 kb on - strand, within MPMX20_01750at 1843.480 kb on + strandat 1843.488 kb on - strandat 1843.488 kb on - strandat 1843.490 kb on + strandat 1843.519 kb on - strandat 1843.633 kb on - strandat 1843.633 kb on - strandat 1843.671 kb on + strand, within MPMX20_01751at 1843.671 kb on + strand, within MPMX20_01751at 1843.679 kb on - strand, within MPMX20_01751

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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1,840,184 - MPMX20_01746 0.15 -0.5
1,840,223 - MPMX20_01746 0.19 -3.4
1,840,257 - MPMX20_01746 0.23 +0.3
1,840,284 - MPMX20_01746 0.26 -0.9
1,840,306 + MPMX20_01746 0.28 -1.0
1,840,461 + MPMX20_01746 0.45 +2.3
1,840,474 - MPMX20_01746 0.46 -0.5
1,840,496 + MPMX20_01746 0.49 +0.8
1,840,542 + MPMX20_01746 0.54 -0.4
1,840,629 + MPMX20_01746 0.63 +3.0
1,840,629 + MPMX20_01746 0.63 -0.9
1,840,637 - MPMX20_01746 0.64 +0.3
1,840,738 + MPMX20_01746 0.75 -1.1
1,840,774 - MPMX20_01746 0.79 +0.1
1,840,823 + MPMX20_01746 0.84 +1.2
1,840,823 + MPMX20_01746 0.84 +0.2
1,840,823 + MPMX20_01746 0.84 -0.2
1,840,831 - MPMX20_01746 0.85 -0.2
1,840,911 + +1.0
1,840,919 - +0.0
1,840,941 + +2.1
1,840,941 + +1.8
1,840,941 + -1.5
1,840,953 + -0.0
1,840,961 - +0.2
1,842,651 + -1.0
1,842,714 + -2.0
1,842,732 - -0.8
1,842,805 + MPMX20_01749 0.12 -0.5
1,842,818 - MPMX20_01749 0.15 -0.5
1,842,855 - MPMX20_01749 0.23 -0.4
1,842,855 - MPMX20_01749 0.23 -1.1
1,842,879 - MPMX20_01749 0.29 -0.0
1,842,912 + MPMX20_01749 0.37 +1.5
1,842,977 + MPMX20_01749 0.52 -0.6
1,842,992 - MPMX20_01749 0.56 +0.5
1,842,992 - MPMX20_01749 0.56 +0.3
1,843,004 - MPMX20_01749 0.58 -3.2
1,843,004 - MPMX20_01749 0.58 -0.7
1,843,009 + MPMX20_01749 0.60 -0.5
1,843,017 - MPMX20_01749 0.62 -1.3
1,843,022 - MPMX20_01749 0.63 -1.1
1,843,027 - MPMX20_01749 0.64 -1.2
1,843,053 + MPMX20_01749 0.70 +0.5
1,843,082 - MPMX20_01749 0.77 -0.0
1,843,089 + MPMX20_01749 0.78 -1.2
1,843,156 - -0.9
1,843,186 + +2.2
1,843,186 + -1.9
1,843,196 + -0.0
1,843,204 - -0.8
1,843,352 + MPMX20_01750 0.57 -1.2
1,843,352 + MPMX20_01750 0.57 +1.5
1,843,352 + MPMX20_01750 0.57 +1.0
1,843,352 + MPMX20_01750 0.57 -2.4
1,843,352 + MPMX20_01750 0.57 -1.5
1,843,352 + MPMX20_01750 0.57 -1.7
1,843,352 + MPMX20_01750 0.57 -1.4
1,843,352 + MPMX20_01750 0.57 -0.5
1,843,352 + MPMX20_01750 0.57 -2.2
1,843,352 + MPMX20_01750 0.57 -1.4
1,843,360 - MPMX20_01750 0.60 +0.5
1,843,360 - MPMX20_01750 0.60 -0.5
1,843,360 - MPMX20_01750 0.60 -2.0
1,843,360 - MPMX20_01750 0.60 -0.9
1,843,360 - MPMX20_01750 0.60 -1.8
1,843,360 - MPMX20_01750 0.60 +0.3
1,843,360 - MPMX20_01750 0.60 +1.5
1,843,360 - MPMX20_01750 0.60 -0.8
1,843,360 - MPMX20_01750 0.60 -0.7
1,843,360 - MPMX20_01750 0.60 -2.2
1,843,360 - MPMX20_01750 0.60 -3.0
1,843,428 + MPMX20_01750 0.83 -0.9
1,843,430 + MPMX20_01750 0.83 -0.1
1,843,430 + MPMX20_01750 0.83 -2.2
1,843,430 + MPMX20_01750 0.83 +1.3
1,843,430 + MPMX20_01750 0.83 -2.2
1,843,433 + MPMX20_01750 0.84 -3.0
1,843,436 - MPMX20_01750 0.85 -0.9
1,843,438 - MPMX20_01750 0.86 -1.0
1,843,438 - MPMX20_01750 0.86 +0.6
1,843,438 - MPMX20_01750 0.86 -0.1
1,843,480 + -1.7
1,843,488 - -0.4
1,843,488 - -2.0
1,843,490 + -3.3
1,843,519 - -2.5
1,843,633 - +0.1
1,843,633 - -0.3
1,843,671 + MPMX20_01751 0.15 +1.8
1,843,671 + MPMX20_01751 0.15 -0.1
1,843,679 - MPMX20_01751 0.16 -0.1

Or see this region's nucleotide sequence