Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01746 and MPMX20_01747 overlap by 88 nucleotides MPMX20_01747 and MPMX20_01748 are separated by 54 nucleotides MPMX20_01748 and MPMX20_01749 are separated by 59 nucleotides MPMX20_01749 and MPMX20_01750 are separated by 4 nucleotides MPMX20_01750 and MPMX20_01751 are separated by 93 nucleotides
MPMX20_01746: MPMX20_01746 - Putative oxidoreductase YceM, at 1,840,045 to 1,840,968
_01746
MPMX20_01747: MPMX20_01747 - hypothetical protein, at 1,840,881 to 1,841,105
_01747
MPMX20_01748: MPMX20_01748 - putative lipid II flippase MurJ, at 1,841,160 to 1,842,695
_01748
MPMX20_01749: MPMX20_01749 - Flagella synthesis protein FlgN, at 1,842,755 to 1,843,180
_01749
MPMX20_01750: MPMX20_01750 - Negative regulator of flagellin synthesis, at 1,843,185 to 1,843,478
_01750
MPMX20_01751: MPMX20_01751 - Flagella basal body P-ring formation protein FlgA, at 1,843,572 to 1,844,231
_01751
Position (kb)
1841
1842
1843 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1840.184 kb on - strand, within MPMX20_01746 at 1840.223 kb on - strand, within MPMX20_01746 at 1840.257 kb on - strand, within MPMX20_01746 at 1840.284 kb on - strand, within MPMX20_01746 at 1840.306 kb on + strand, within MPMX20_01746 at 1840.461 kb on + strand, within MPMX20_01746 at 1840.474 kb on - strand, within MPMX20_01746 at 1840.496 kb on + strand, within MPMX20_01746 at 1840.542 kb on + strand, within MPMX20_01746 at 1840.629 kb on + strand, within MPMX20_01746 at 1840.629 kb on + strand, within MPMX20_01746 at 1840.637 kb on - strand, within MPMX20_01746 at 1840.738 kb on + strand, within MPMX20_01746 at 1840.774 kb on - strand, within MPMX20_01746 at 1840.823 kb on + strand, within MPMX20_01746 at 1840.823 kb on + strand, within MPMX20_01746 at 1840.823 kb on + strand, within MPMX20_01746 at 1840.831 kb on - strand, within MPMX20_01746 at 1840.911 kb on + strand at 1840.919 kb on - strand at 1840.941 kb on + strand at 1840.941 kb on + strand at 1840.941 kb on + strand at 1840.953 kb on + strand at 1840.961 kb on - strand at 1842.651 kb on + strand at 1842.714 kb on + strand at 1842.732 kb on - strand at 1842.805 kb on + strand, within MPMX20_01749 at 1842.818 kb on - strand, within MPMX20_01749 at 1842.855 kb on - strand, within MPMX20_01749 at 1842.855 kb on - strand, within MPMX20_01749 at 1842.879 kb on - strand, within MPMX20_01749 at 1842.912 kb on + strand, within MPMX20_01749 at 1842.977 kb on + strand, within MPMX20_01749 at 1842.992 kb on - strand, within MPMX20_01749 at 1842.992 kb on - strand, within MPMX20_01749 at 1843.004 kb on - strand, within MPMX20_01749 at 1843.004 kb on - strand, within MPMX20_01749 at 1843.009 kb on + strand, within MPMX20_01749 at 1843.017 kb on - strand, within MPMX20_01749 at 1843.022 kb on - strand, within MPMX20_01749 at 1843.027 kb on - strand, within MPMX20_01749 at 1843.053 kb on + strand, within MPMX20_01749 at 1843.082 kb on - strand, within MPMX20_01749 at 1843.089 kb on + strand, within MPMX20_01749 at 1843.156 kb on - strand at 1843.186 kb on + strand at 1843.186 kb on + strand at 1843.196 kb on + strand at 1843.204 kb on - strand at 1843.352 kb on + strand, within MPMX20_01750 at 1843.352 kb on + strand, within MPMX20_01750 at 1843.352 kb on + strand, within MPMX20_01750 at 1843.352 kb on + strand, within MPMX20_01750 at 1843.352 kb on + strand, within MPMX20_01750 at 1843.352 kb on + strand, within MPMX20_01750 at 1843.352 kb on + strand, within MPMX20_01750 at 1843.352 kb on + strand, within MPMX20_01750 at 1843.352 kb on + strand, within MPMX20_01750 at 1843.352 kb on + strand, within MPMX20_01750 at 1843.360 kb on - strand, within MPMX20_01750 at 1843.360 kb on - strand, within MPMX20_01750 at 1843.360 kb on - strand, within MPMX20_01750 at 1843.360 kb on - strand, within MPMX20_01750 at 1843.360 kb on - strand, within MPMX20_01750 at 1843.360 kb on - strand, within MPMX20_01750 at 1843.360 kb on - strand, within MPMX20_01750 at 1843.360 kb on - strand, within MPMX20_01750 at 1843.360 kb on - strand, within MPMX20_01750 at 1843.360 kb on - strand, within MPMX20_01750 at 1843.360 kb on - strand, within MPMX20_01750 at 1843.428 kb on + strand, within MPMX20_01750 at 1843.430 kb on + strand, within MPMX20_01750 at 1843.430 kb on + strand, within MPMX20_01750 at 1843.430 kb on + strand, within MPMX20_01750 at 1843.430 kb on + strand, within MPMX20_01750 at 1843.433 kb on + strand, within MPMX20_01750 at 1843.436 kb on - strand, within MPMX20_01750 at 1843.438 kb on - strand, within MPMX20_01750 at 1843.438 kb on - strand, within MPMX20_01750 at 1843.438 kb on - strand, within MPMX20_01750 at 1843.480 kb on + strand at 1843.488 kb on - strand at 1843.488 kb on - strand at 1843.490 kb on + strand at 1843.519 kb on - strand at 1843.633 kb on - strand at 1843.633 kb on - strand at 1843.671 kb on + strand, within MPMX20_01751 at 1843.671 kb on + strand, within MPMX20_01751 at 1843.679 kb on - strand, within MPMX20_01751
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 1,840,184 - MPMX20_01746 0.15 -0.5 1,840,223 - MPMX20_01746 0.19 -3.4 1,840,257 - MPMX20_01746 0.23 +0.3 1,840,284 - MPMX20_01746 0.26 -0.9 1,840,306 + MPMX20_01746 0.28 -1.0 1,840,461 + MPMX20_01746 0.45 +2.3 1,840,474 - MPMX20_01746 0.46 -0.5 1,840,496 + MPMX20_01746 0.49 +0.8 1,840,542 + MPMX20_01746 0.54 -0.4 1,840,629 + MPMX20_01746 0.63 +3.0 1,840,629 + MPMX20_01746 0.63 -0.9 1,840,637 - MPMX20_01746 0.64 +0.3 1,840,738 + MPMX20_01746 0.75 -1.1 1,840,774 - MPMX20_01746 0.79 +0.1 1,840,823 + MPMX20_01746 0.84 +1.2 1,840,823 + MPMX20_01746 0.84 +0.2 1,840,823 + MPMX20_01746 0.84 -0.2 1,840,831 - MPMX20_01746 0.85 -0.2 1,840,911 + +1.0 1,840,919 - +0.0 1,840,941 + +2.1 1,840,941 + +1.8 1,840,941 + -1.5 1,840,953 + -0.0 1,840,961 - +0.2 1,842,651 + -1.0 1,842,714 + -2.0 1,842,732 - -0.8 1,842,805 + MPMX20_01749 0.12 -0.5 1,842,818 - MPMX20_01749 0.15 -0.5 1,842,855 - MPMX20_01749 0.23 -0.4 1,842,855 - MPMX20_01749 0.23 -1.1 1,842,879 - MPMX20_01749 0.29 -0.0 1,842,912 + MPMX20_01749 0.37 +1.5 1,842,977 + MPMX20_01749 0.52 -0.6 1,842,992 - MPMX20_01749 0.56 +0.5 1,842,992 - MPMX20_01749 0.56 +0.3 1,843,004 - MPMX20_01749 0.58 -3.2 1,843,004 - MPMX20_01749 0.58 -0.7 1,843,009 + MPMX20_01749 0.60 -0.5 1,843,017 - MPMX20_01749 0.62 -1.3 1,843,022 - MPMX20_01749 0.63 -1.1 1,843,027 - MPMX20_01749 0.64 -1.2 1,843,053 + MPMX20_01749 0.70 +0.5 1,843,082 - MPMX20_01749 0.77 -0.0 1,843,089 + MPMX20_01749 0.78 -1.2 1,843,156 - -0.9 1,843,186 + +2.2 1,843,186 + -1.9 1,843,196 + -0.0 1,843,204 - -0.8 1,843,352 + MPMX20_01750 0.57 -1.2 1,843,352 + MPMX20_01750 0.57 +1.5 1,843,352 + MPMX20_01750 0.57 +1.0 1,843,352 + MPMX20_01750 0.57 -2.4 1,843,352 + MPMX20_01750 0.57 -1.5 1,843,352 + MPMX20_01750 0.57 -1.7 1,843,352 + MPMX20_01750 0.57 -1.4 1,843,352 + MPMX20_01750 0.57 -0.5 1,843,352 + MPMX20_01750 0.57 -2.2 1,843,352 + MPMX20_01750 0.57 -1.4 1,843,360 - MPMX20_01750 0.60 +0.5 1,843,360 - MPMX20_01750 0.60 -0.5 1,843,360 - MPMX20_01750 0.60 -2.0 1,843,360 - MPMX20_01750 0.60 -0.9 1,843,360 - MPMX20_01750 0.60 -1.8 1,843,360 - MPMX20_01750 0.60 +0.3 1,843,360 - MPMX20_01750 0.60 +1.5 1,843,360 - MPMX20_01750 0.60 -0.8 1,843,360 - MPMX20_01750 0.60 -0.7 1,843,360 - MPMX20_01750 0.60 -2.2 1,843,360 - MPMX20_01750 0.60 -3.0 1,843,428 + MPMX20_01750 0.83 -0.9 1,843,430 + MPMX20_01750 0.83 -0.1 1,843,430 + MPMX20_01750 0.83 -2.2 1,843,430 + MPMX20_01750 0.83 +1.3 1,843,430 + MPMX20_01750 0.83 -2.2 1,843,433 + MPMX20_01750 0.84 -3.0 1,843,436 - MPMX20_01750 0.85 -0.9 1,843,438 - MPMX20_01750 0.86 -1.0 1,843,438 - MPMX20_01750 0.86 +0.6 1,843,438 - MPMX20_01750 0.86 -0.1 1,843,480 + -1.7 1,843,488 - -0.4 1,843,488 - -2.0 1,843,490 + -3.3 1,843,519 - -2.5 1,843,633 - +0.1 1,843,633 - -0.3 1,843,671 + MPMX20_01751 0.15 +1.8 1,843,671 + MPMX20_01751 0.15 -0.1 1,843,679 - MPMX20_01751 0.16 -0.1
Or see this region's nucleotide sequence