Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01329

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01327 and MPMX20_01328 are separated by 44 nucleotidesMPMX20_01328 and MPMX20_01329 are separated by 108 nucleotidesMPMX20_01329 and MPMX20_01330 are separated by 288 nucleotidesMPMX20_01330 and MPMX20_01331 are separated by 155 nucleotides MPMX20_01327: MPMX20_01327 - Chitoporin, at 1,386,600 to 1,387,997 _01327 MPMX20_01328: MPMX20_01328 - putative lipoprotein ChiQ, at 1,388,042 to 1,388,374 _01328 MPMX20_01329: MPMX20_01329 - Ferric uptake regulation protein, at 1,388,483 to 1,388,929 _01329 MPMX20_01330: MPMX20_01330 - Flavodoxin 1, at 1,389,218 to 1,389,748 _01330 MPMX20_01331: MPMX20_01331 - putative protein YbfE, at 1,389,904 to 1,390,191 _01331 Position (kb) 1388 1389Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1387.536 kb on - strand, within MPMX20_01327at 1387.548 kb on + strand, within MPMX20_01327at 1387.566 kb on - strand, within MPMX20_01327at 1387.638 kb on - strand, within MPMX20_01327at 1387.638 kb on - strand, within MPMX20_01327at 1387.768 kb on - strand, within MPMX20_01327at 1387.776 kb on - strand, within MPMX20_01327at 1387.808 kb on + strand, within MPMX20_01327at 1387.844 kb on + strand, within MPMX20_01327at 1387.844 kb on + strand, within MPMX20_01327at 1387.852 kb on - strand, within MPMX20_01327at 1387.868 kb on + strandat 1387.948 kb on - strandat 1387.991 kb on + strandat 1388.094 kb on + strand, within MPMX20_01328at 1388.160 kb on - strand, within MPMX20_01328at 1388.160 kb on - strand, within MPMX20_01328at 1388.162 kb on + strand, within MPMX20_01328at 1388.162 kb on + strand, within MPMX20_01328at 1388.283 kb on + strand, within MPMX20_01328at 1388.283 kb on + strand, within MPMX20_01328at 1388.283 kb on + strand, within MPMX20_01328at 1388.291 kb on - strand, within MPMX20_01328at 1388.336 kb on - strand, within MPMX20_01328at 1388.402 kb on + strandat 1388.460 kb on + strandat 1388.545 kb on + strand, within MPMX20_01329at 1388.654 kb on + strand, within MPMX20_01329at 1388.654 kb on + strand, within MPMX20_01329at 1388.895 kb on - strandat 1388.906 kb on - strandat 1389.009 kb on - strandat 1389.122 kb on + strandat 1389.122 kb on + strandat 1389.122 kb on + strandat 1389.122 kb on + strandat 1389.122 kb on + strandat 1389.122 kb on + strandat 1389.130 kb on - strandat 1389.130 kb on - strandat 1389.130 kb on - strandat 1389.130 kb on - strandat 1389.130 kb on - strandat 1389.130 kb on - strandat 1389.135 kb on - strandat 1389.192 kb on + strandat 1389.250 kb on - strandat 1389.809 kb on - strandat 1389.822 kb on + strandat 1389.854 kb on + strandat 1389.854 kb on + strandat 1389.854 kb on + strandat 1389.854 kb on + strandat 1389.854 kb on + strandat 1389.854 kb on + strandat 1389.854 kb on + strandat 1389.854 kb on + strandat 1389.854 kb on + strandat 1389.854 kb on + strandat 1389.854 kb on + strandat 1389.862 kb on - strandat 1389.862 kb on - strandat 1389.862 kb on - strandat 1389.862 kb on - strandat 1389.862 kb on - strandat 1389.862 kb on - strandat 1389.864 kb on - strandat 1389.869 kb on - strandat 1389.880 kb on + strandat 1389.923 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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1,387,536 - MPMX20_01327 0.67 -0.3
1,387,548 + MPMX20_01327 0.68 +0.7
1,387,566 - MPMX20_01327 0.69 +0.4
1,387,638 - MPMX20_01327 0.74 +2.8
1,387,638 - MPMX20_01327 0.74 +0.3
1,387,768 - MPMX20_01327 0.84 -0.1
1,387,776 - MPMX20_01327 0.84 -0.2
1,387,808 + MPMX20_01327 0.86 -0.3
1,387,844 + MPMX20_01327 0.89 -1.2
1,387,844 + MPMX20_01327 0.89 +0.5
1,387,852 - MPMX20_01327 0.90 -1.0
1,387,868 + +0.4
1,387,948 - -2.5
1,387,991 + +2.3
1,388,094 + MPMX20_01328 0.16 +0.8
1,388,160 - MPMX20_01328 0.35 +0.3
1,388,160 - MPMX20_01328 0.35 +0.1
1,388,162 + MPMX20_01328 0.36 -1.9
1,388,162 + MPMX20_01328 0.36 +0.7
1,388,283 + MPMX20_01328 0.72 +0.1
1,388,283 + MPMX20_01328 0.72 +0.4
1,388,283 + MPMX20_01328 0.72 +0.3
1,388,291 - MPMX20_01328 0.75 +0.5
1,388,336 - MPMX20_01328 0.88 +0.4
1,388,402 + -0.7
1,388,460 + -0.8
1,388,545 + MPMX20_01329 0.14 -0.2
1,388,654 + MPMX20_01329 0.38 -1.0
1,388,654 + MPMX20_01329 0.38 -1.2
1,388,895 - -1.0
1,388,906 - -0.5
1,389,009 - -1.0
1,389,122 + -1.0
1,389,122 + -1.2
1,389,122 + -2.1
1,389,122 + -1.3
1,389,122 + +0.5
1,389,122 + -0.2
1,389,130 - -1.5
1,389,130 - -0.3
1,389,130 - +0.9
1,389,130 - -0.5
1,389,130 - -0.5
1,389,130 - +1.7
1,389,135 - -0.2
1,389,192 + -1.0
1,389,250 - -0.8
1,389,809 - -0.5
1,389,822 + -1.7
1,389,854 + -0.7
1,389,854 + +0.7
1,389,854 + -0.5
1,389,854 + +1.1
1,389,854 + +1.5
1,389,854 + +0.2
1,389,854 + -0.6
1,389,854 + -0.4
1,389,854 + -0.0
1,389,854 + -0.0
1,389,854 + -0.2
1,389,862 - +1.1
1,389,862 - -1.7
1,389,862 - -0.0
1,389,862 - -0.3
1,389,862 - +0.3
1,389,862 - +1.0
1,389,864 - +0.9
1,389,869 - -0.7
1,389,880 + +1.4
1,389,923 + -1.4

Or see this region's nucleotide sequence