Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00861 and MPMX20_00862 are separated by 122 nucleotides MPMX20_00862 and MPMX20_00863 are separated by 3 nucleotides MPMX20_00863 and MPMX20_00864 are separated by 103 nucleotides MPMX20_00864 and MPMX20_00865 are separated by 3 nucleotides
MPMX20_00861: MPMX20_00861 - Outer membrane protein assembly factor BamA, at 909,503 to 911,920
_00861
MPMX20_00862: MPMX20_00862 - Chaperone protein Skp, at 912,043 to 912,537
_00862
MPMX20_00863: MPMX20_00863 - UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase, at 912,541 to 913,566
_00863
MPMX20_00864: MPMX20_00864 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ, at 913,670 to 914,125
_00864
MPMX20_00865: MPMX20_00865 - Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase, at 914,129 to 914,917
_00865
Position (kb) 912
913
914 Strain fitness (log2 ratio) -1
0
1
2 at 911.949 kb on + strand at 911.949 kb on + strand at 912.067 kb on + strand at 912.067 kb on + strand at 912.089 kb on + strand at 912.496 kb on + strand at 913.561 kb on + strand at 913.561 kb on + strand at 913.567 kb on + strand at 913.577 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 911,949 + +0.2 911,949 + -1.6 912,067 + +2.0 912,067 + +0.2 912,089 + -0.5 912,496 + -0.3 913,561 + -0.6 913,561 + +0.0 913,567 + -0.9 913,577 + +0.0
Or see this region's nucleotide sequence