Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00727 and MPMX20_00728 are separated by 92 nucleotides MPMX20_00728 and MPMX20_00729 are separated by 1 nucleotides MPMX20_00729 and MPMX20_00730 are separated by 158 nucleotides MPMX20_00730 and MPMX20_00731 overlap by 8 nucleotides
MPMX20_00727: MPMX20_00727 - Lipoprotein signal peptidase, at 752,739 to 753,239
_00727
MPMX20_00728: MPMX20_00728 - FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase, at 753,332 to 753,781
_00728
MPMX20_00729: MPMX20_00729 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, at 753,783 to 754,733
_00729
MPMX20_00730: MPMX20_00730 - Glucose-6-phosphate isomerase, at 754,892 to 755,446
_00730
MPMX20_00731: MPMX20_00731 - hypothetical protein, at 755,439 to 756,209
_00731
Position (kb) 753
754
755 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 753.344 kb on + strand at 753.566 kb on + strand, within MPMX20_00728 at 753.701 kb on + strand, within MPMX20_00728 at 754.750 kb on + strand at 754.751 kb on - strand at 754.799 kb on + strand at 754.799 kb on - strand at 754.867 kb on - strand at 754.878 kb on + strand at 754.881 kb on - strand at 754.896 kb on - strand at 754.924 kb on + strand at 754.924 kb on + strand at 754.925 kb on + strand at 754.930 kb on + strand at 754.935 kb on + strand at 754.935 kb on + strand at 754.935 kb on + strand at 755.128 kb on - strand, within MPMX20_00730 at 755.169 kb on + strand, within MPMX20_00730 at 755.169 kb on + strand, within MPMX20_00730 at 755.169 kb on + strand, within MPMX20_00730 at 755.177 kb on - strand, within MPMX20_00730 at 755.177 kb on - strand, within MPMX20_00730 at 755.200 kb on + strand, within MPMX20_00730 at 755.246 kb on + strand, within MPMX20_00730 at 755.246 kb on + strand, within MPMX20_00730 at 755.246 kb on + strand, within MPMX20_00730 at 755.332 kb on + strand, within MPMX20_00730 at 755.340 kb on - strand, within MPMX20_00730 at 755.342 kb on - strand, within MPMX20_00730 at 755.376 kb on - strand, within MPMX20_00730 at 755.446 kb on + strand at 755.464 kb on - strand at 755.572 kb on + strand, within MPMX20_00731 at 755.572 kb on + strand, within MPMX20_00731 at 755.606 kb on + strand, within MPMX20_00731 at 755.664 kb on + strand, within MPMX20_00731 at 755.664 kb on + strand, within MPMX20_00731 at 755.664 kb on + strand, within MPMX20_00731 at 755.665 kb on - strand, within MPMX20_00731 at 755.665 kb on - strand, within MPMX20_00731
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 753,344 + +0.7 753,566 + MPMX20_00728 0.52 -0.1 753,701 + MPMX20_00728 0.82 +0.6 754,750 + +0.4 754,751 - -0.8 754,799 + -1.5 754,799 - +1.0 754,867 - +0.6 754,878 + -0.3 754,881 - -0.0 754,896 - -0.1 754,924 + -0.0 754,924 + -0.1 754,925 + -0.9 754,930 + +0.8 754,935 + -1.2 754,935 + -0.6 754,935 + -0.4 755,128 - MPMX20_00730 0.43 -1.3 755,169 + MPMX20_00730 0.50 -0.4 755,169 + MPMX20_00730 0.50 -2.8 755,169 + MPMX20_00730 0.50 -0.9 755,177 - MPMX20_00730 0.51 -0.5 755,177 - MPMX20_00730 0.51 -1.8 755,200 + MPMX20_00730 0.55 +1.1 755,246 + MPMX20_00730 0.64 +0.1 755,246 + MPMX20_00730 0.64 +0.2 755,246 + MPMX20_00730 0.64 +0.1 755,332 + MPMX20_00730 0.79 +1.6 755,340 - MPMX20_00730 0.81 +0.4 755,342 - MPMX20_00730 0.81 -0.7 755,376 - MPMX20_00730 0.87 -0.7 755,446 + +1.0 755,464 - -1.0 755,572 + MPMX20_00731 0.17 -0.1 755,572 + MPMX20_00731 0.17 -0.7 755,606 + MPMX20_00731 0.22 -0.1 755,664 + MPMX20_00731 0.29 -1.2 755,664 + MPMX20_00731 0.29 +0.8 755,664 + MPMX20_00731 0.29 -0.4 755,665 - MPMX20_00731 0.29 +0.6 755,665 - MPMX20_00731 0.29 -1.9
Or see this region's nucleotide sequence