Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00113 and MPMX20_00114 are separated by 2 nucleotides MPMX20_00114 and MPMX20_00115 are separated by 215 nucleotides
MPMX20_00113: MPMX20_00113 - ADP-heptose--LPS heptosyltransferase 2, at 114,032 to 115,078
_00113
MPMX20_00114: MPMX20_00114 - ADP-L-glycero-D-manno-heptose-6-epimerase, at 115,081 to 116,013
_00114
MPMX20_00115: MPMX20_00115 - 2-amino-3-ketobutyrate coenzyme A ligase, at 116,229 to 117,425
_00115
Position (kb)
115
116
117 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 114.511 kb on - strand, within MPMX20_00113 at 114.731 kb on - strand, within MPMX20_00113 at 116.023 kb on - strand at 116.098 kb on - strand at 116.113 kb on + strand at 116.113 kb on + strand at 116.113 kb on + strand at 116.113 kb on + strand at 116.113 kb on + strand at 116.119 kb on + strand at 116.121 kb on - strand at 116.121 kb on - strand at 116.121 kb on - strand at 116.121 kb on - strand at 116.121 kb on - strand at 116.121 kb on - strand at 116.121 kb on - strand at 116.121 kb on - strand at 116.121 kb on - strand at 116.128 kb on - strand at 116.152 kb on + strand at 116.183 kb on + strand at 116.183 kb on + strand at 116.183 kb on + strand at 116.191 kb on - strand at 116.191 kb on - strand at 116.191 kb on - strand at 116.252 kb on + strand at 116.258 kb on - strand at 116.289 kb on - strand at 116.291 kb on + strand at 116.299 kb on - strand at 116.309 kb on + strand at 116.339 kb on - strand at 116.386 kb on - strand, within MPMX20_00115 at 116.401 kb on + strand, within MPMX20_00115 at 116.401 kb on + strand, within MPMX20_00115 at 116.406 kb on + strand, within MPMX20_00115 at 116.465 kb on - strand, within MPMX20_00115 at 116.481 kb on + strand, within MPMX20_00115 at 116.489 kb on - strand, within MPMX20_00115 at 116.491 kb on + strand, within MPMX20_00115 at 116.491 kb on + strand, within MPMX20_00115 at 116.491 kb on + strand, within MPMX20_00115 at 116.491 kb on + strand, within MPMX20_00115 at 116.491 kb on + strand, within MPMX20_00115 at 116.491 kb on + strand, within MPMX20_00115 at 116.491 kb on + strand, within MPMX20_00115 at 116.491 kb on + strand, within MPMX20_00115 at 116.499 kb on - strand, within MPMX20_00115 at 116.499 kb on - strand, within MPMX20_00115 at 116.499 kb on - strand, within MPMX20_00115 at 116.499 kb on - strand, within MPMX20_00115 at 116.499 kb on - strand, within MPMX20_00115 at 116.499 kb on - strand, within MPMX20_00115 at 116.499 kb on - strand, within MPMX20_00115 at 116.499 kb on - strand, within MPMX20_00115 at 116.524 kb on - strand, within MPMX20_00115 at 116.544 kb on + strand, within MPMX20_00115 at 116.546 kb on + strand, within MPMX20_00115 at 116.582 kb on + strand, within MPMX20_00115 at 116.590 kb on - strand, within MPMX20_00115 at 116.599 kb on + strand, within MPMX20_00115 at 116.607 kb on - strand, within MPMX20_00115 at 116.607 kb on - strand, within MPMX20_00115 at 116.607 kb on - strand, within MPMX20_00115 at 116.630 kb on + strand, within MPMX20_00115 at 116.633 kb on - strand, within MPMX20_00115 at 116.638 kb on - strand, within MPMX20_00115 at 116.653 kb on + strand, within MPMX20_00115 at 116.663 kb on + strand, within MPMX20_00115 at 116.663 kb on + strand, within MPMX20_00115 at 116.663 kb on + strand, within MPMX20_00115 at 116.671 kb on - strand, within MPMX20_00115 at 116.684 kb on - strand, within MPMX20_00115 at 116.804 kb on + strand, within MPMX20_00115 at 116.804 kb on + strand, within MPMX20_00115 at 116.804 kb on + strand, within MPMX20_00115 at 116.804 kb on + strand, within MPMX20_00115 at 116.804 kb on + strand, within MPMX20_00115 at 116.812 kb on - strand, within MPMX20_00115 at 116.812 kb on - strand, within MPMX20_00115 at 116.812 kb on - strand, within MPMX20_00115 at 116.831 kb on + strand, within MPMX20_00115 at 116.846 kb on + strand, within MPMX20_00115 at 116.854 kb on - strand, within MPMX20_00115 at 116.912 kb on - strand, within MPMX20_00115 at 116.944 kb on - strand, within MPMX20_00115 at 116.954 kb on + strand, within MPMX20_00115 at 116.969 kb on - strand, within MPMX20_00115 at 116.974 kb on - strand, within MPMX20_00115 at 116.989 kb on - strand, within MPMX20_00115
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 114,511 - MPMX20_00113 0.46 +1.1 114,731 - MPMX20_00113 0.67 -0.5 116,023 - +1.8 116,098 - +0.0 116,113 + -0.0 116,113 + +0.4 116,113 + -0.0 116,113 + +0.3 116,113 + +1.0 116,119 + +0.6 116,121 - -0.5 116,121 - -0.1 116,121 - +0.4 116,121 - -0.3 116,121 - -1.7 116,121 - +0.1 116,121 - -0.1 116,121 - -0.9 116,121 - +0.7 116,128 - +0.0 116,152 + -1.1 116,183 + -0.5 116,183 + -0.7 116,183 + -2.0 116,191 - -0.9 116,191 - +0.2 116,191 - -0.5 116,252 + -0.2 116,258 - -0.2 116,289 - +0.2 116,291 + +1.6 116,299 - +1.1 116,309 + +0.8 116,339 - -0.7 116,386 - MPMX20_00115 0.13 -0.9 116,401 + MPMX20_00115 0.14 -1.0 116,401 + MPMX20_00115 0.14 -0.2 116,406 + MPMX20_00115 0.15 -0.6 116,465 - MPMX20_00115 0.20 -0.1 116,481 + MPMX20_00115 0.21 +0.0 116,489 - MPMX20_00115 0.22 -0.1 116,491 + MPMX20_00115 0.22 -1.9 116,491 + MPMX20_00115 0.22 +0.8 116,491 + MPMX20_00115 0.22 +0.4 116,491 + MPMX20_00115 0.22 -0.5 116,491 + MPMX20_00115 0.22 -0.4 116,491 + MPMX20_00115 0.22 -1.4 116,491 + MPMX20_00115 0.22 -1.7 116,491 + MPMX20_00115 0.22 +1.3 116,499 - MPMX20_00115 0.23 +0.5 116,499 - MPMX20_00115 0.23 -1.1 116,499 - MPMX20_00115 0.23 -1.1 116,499 - MPMX20_00115 0.23 -1.2 116,499 - MPMX20_00115 0.23 -0.3 116,499 - MPMX20_00115 0.23 +0.9 116,499 - MPMX20_00115 0.23 -1.7 116,499 - MPMX20_00115 0.23 +0.1 116,524 - MPMX20_00115 0.25 -0.2 116,544 + MPMX20_00115 0.26 +0.4 116,546 + MPMX20_00115 0.26 +0.8 116,582 + MPMX20_00115 0.29 -0.1 116,590 - MPMX20_00115 0.30 -0.1 116,599 + MPMX20_00115 0.31 -0.1 116,607 - MPMX20_00115 0.32 +0.1 116,607 - MPMX20_00115 0.32 +1.6 116,607 - MPMX20_00115 0.32 +0.6 116,630 + MPMX20_00115 0.34 -1.2 116,633 - MPMX20_00115 0.34 +0.4 116,638 - MPMX20_00115 0.34 -0.0 116,653 + MPMX20_00115 0.35 +0.1 116,663 + MPMX20_00115 0.36 -0.1 116,663 + MPMX20_00115 0.36 +0.9 116,663 + MPMX20_00115 0.36 -1.7 116,671 - MPMX20_00115 0.37 +0.2 116,684 - MPMX20_00115 0.38 +1.7 116,804 + MPMX20_00115 0.48 -0.4 116,804 + MPMX20_00115 0.48 +0.4 116,804 + MPMX20_00115 0.48 +1.7 116,804 + MPMX20_00115 0.48 +0.3 116,804 + MPMX20_00115 0.48 +0.6 116,812 - MPMX20_00115 0.49 +0.5 116,812 - MPMX20_00115 0.49 -1.4 116,812 - MPMX20_00115 0.49 +0.3 116,831 + MPMX20_00115 0.50 -0.7 116,846 + MPMX20_00115 0.52 -0.4 116,854 - MPMX20_00115 0.52 +1.8 116,912 - MPMX20_00115 0.57 -1.2 116,944 - MPMX20_00115 0.60 +1.0 116,954 + MPMX20_00115 0.61 -0.9 116,969 - MPMX20_00115 0.62 +0.2 116,974 - MPMX20_00115 0.62 +0.4 116,989 - MPMX20_00115 0.63 +0.6
Or see this region's nucleotide sequence