Experiment: H2 N-free with 10mM L-Citrulline
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS08270 and MMP_RS08275 are separated by 69 nucleotides MMP_RS08275 and MMP_RS08280 are separated by 19 nucleotides MMP_RS08280 and MMP_RS08285 are separated by 23 nucleotides MMP_RS08285 and MMP_RS08290 are separated by 111 nucleotides
MMP_RS08270: MMP_RS08270 - formylmethanofuran--tetrahydromethanopterin N-formyltransferase, at 1,556,252 to 1,557,160
_RS08270
MMP_RS08275: MMP_RS08275 - hypothetical protein, at 1,557,230 to 1,557,904
_RS08275
MMP_RS08280: MMP_RS08280 - proteasome assembly chaperone family protein, at 1,557,924 to 1,558,676
_RS08280
MMP_RS08285: MMP_RS08285 - serine/threonine protein kinase, at 1,558,700 to 1,559,377
_RS08285
MMP_RS08290: MMP_RS08290 - DNA-binding protein Alba, at 1,559,489 to 1,559,758
_RS08290
Position (kb) 1557
1558
1559 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1557.172 kb on - strand at 1557.173 kb on + strand at 1557.179 kb on + strand at 1557.209 kb on + strand at 1557.212 kb on - strand at 1557.275 kb on + strand at 1557.300 kb on + strand, within MMP_RS08275 at 1557.300 kb on + strand, within MMP_RS08275 at 1557.300 kb on + strand, within MMP_RS08275 at 1557.525 kb on - strand, within MMP_RS08275 at 1557.526 kb on + strand, within MMP_RS08275 at 1557.526 kb on + strand, within MMP_RS08275 at 1557.530 kb on - strand, within MMP_RS08275 at 1557.551 kb on - strand, within MMP_RS08275 at 1557.552 kb on + strand, within MMP_RS08275 at 1557.552 kb on + strand, within MMP_RS08275 at 1557.556 kb on + strand, within MMP_RS08275 at 1557.556 kb on + strand, within MMP_RS08275 at 1557.613 kb on + strand, within MMP_RS08275 at 1557.613 kb on + strand, within MMP_RS08275 at 1557.614 kb on - strand, within MMP_RS08275 at 1557.615 kb on + strand, within MMP_RS08275 at 1557.636 kb on - strand, within MMP_RS08275 at 1557.808 kb on - strand, within MMP_RS08275 at 1557.935 kb on + strand at 1557.935 kb on + strand at 1557.935 kb on + strand at 1557.940 kb on + strand at 1558.398 kb on - strand, within MMP_RS08280 at 1558.528 kb on + strand, within MMP_RS08280 at 1558.671 kb on - strand at 1558.749 kb on + strand at 1558.796 kb on - strand, within MMP_RS08285 at 1558.796 kb on - strand, within MMP_RS08285 at 1558.797 kb on + strand, within MMP_RS08285 at 1558.799 kb on + strand, within MMP_RS08285 at 1558.799 kb on + strand, within MMP_RS08285 at 1558.800 kb on - strand, within MMP_RS08285 at 1558.801 kb on + strand, within MMP_RS08285 at 1558.801 kb on + strand, within MMP_RS08285 at 1558.801 kb on + strand, within MMP_RS08285 at 1558.880 kb on + strand, within MMP_RS08285 at 1559.014 kb on - strand, within MMP_RS08285 at 1559.050 kb on + strand, within MMP_RS08285 at 1559.163 kb on + strand, within MMP_RS08285 at 1559.163 kb on + strand, within MMP_RS08285 at 1559.189 kb on + strand, within MMP_RS08285 at 1559.214 kb on - strand, within MMP_RS08285 at 1559.447 kb on + strand at 1559.449 kb on + strand at 1559.451 kb on + strand at 1559.505 kb on + strand at 1559.532 kb on + strand, within MMP_RS08290 at 1559.549 kb on + strand, within MMP_RS08290 at 1559.558 kb on + strand, within MMP_RS08290 at 1559.580 kb on - strand, within MMP_RS08290
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 10mM L-Citrulline remove 1,557,172 - +0.6 1,557,173 + -0.3 1,557,179 + +0.8 1,557,209 + +2.0 1,557,212 - +2.6 1,557,275 + +0.9 1,557,300 + MMP_RS08275 0.10 +2.1 1,557,300 + MMP_RS08275 0.10 +1.8 1,557,300 + MMP_RS08275 0.10 +1.2 1,557,525 - MMP_RS08275 0.44 +1.1 1,557,526 + MMP_RS08275 0.44 +0.9 1,557,526 + MMP_RS08275 0.44 +0.9 1,557,530 - MMP_RS08275 0.44 -0.1 1,557,551 - MMP_RS08275 0.48 -0.8 1,557,552 + MMP_RS08275 0.48 -0.8 1,557,552 + MMP_RS08275 0.48 +1.2 1,557,556 + MMP_RS08275 0.48 -0.3 1,557,556 + MMP_RS08275 0.48 +1.4 1,557,613 + MMP_RS08275 0.57 +0.9 1,557,613 + MMP_RS08275 0.57 +0.1 1,557,614 - MMP_RS08275 0.57 +1.6 1,557,615 + MMP_RS08275 0.57 +0.1 1,557,636 - MMP_RS08275 0.60 +2.0 1,557,808 - MMP_RS08275 0.86 +0.5 1,557,935 + +2.0 1,557,935 + +1.9 1,557,935 + +0.0 1,557,940 + +0.6 1,558,398 - MMP_RS08280 0.63 +0.7 1,558,528 + MMP_RS08280 0.80 +0.4 1,558,671 - +0.6 1,558,749 + +0.8 1,558,796 - MMP_RS08285 0.14 +0.2 1,558,796 - MMP_RS08285 0.14 +0.7 1,558,797 + MMP_RS08285 0.14 +1.3 1,558,799 + MMP_RS08285 0.15 +1.0 1,558,799 + MMP_RS08285 0.15 +1.1 1,558,800 - MMP_RS08285 0.15 +1.2 1,558,801 + MMP_RS08285 0.15 -0.3 1,558,801 + MMP_RS08285 0.15 +0.4 1,558,801 + MMP_RS08285 0.15 +1.0 1,558,880 + MMP_RS08285 0.27 -0.1 1,559,014 - MMP_RS08285 0.46 -0.0 1,559,050 + MMP_RS08285 0.52 +1.4 1,559,163 + MMP_RS08285 0.68 +0.4 1,559,163 + MMP_RS08285 0.68 +0.9 1,559,189 + MMP_RS08285 0.72 -1.4 1,559,214 - MMP_RS08285 0.76 +1.1 1,559,447 + +0.6 1,559,449 + +0.7 1,559,451 + -0.6 1,559,505 + -0.6 1,559,532 + MMP_RS08290 0.16 -0.1 1,559,549 + MMP_RS08290 0.22 -2.7 1,559,558 + MMP_RS08290 0.26 +1.4 1,559,580 - MMP_RS08290 0.34 -0.6
Or see this region's nucleotide sequence