Experiment: H2 N-free with 10mM L-Citrulline
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS06040 and MMP_RS06045 are separated by 29 nucleotides MMP_RS06045 and MMP_RS06050 are separated by 122 nucleotides MMP_RS06050 and MMP_RS06055 are separated by 219 nucleotides
MMP_RS06040: MMP_RS06040 - CDP-diacylglycerol--serine O-phosphatidyltransferase, at 1,154,613 to 1,155,227
_RS06040
MMP_RS06045: MMP_RS06045 - DNA polymerase, at 1,155,257 to 1,155,808
_RS06045
MMP_RS06050: MMP_RS06050 - ZIP family metal transporter, at 1,155,931 to 1,156,740
_RS06050
MMP_RS06055: MMP_RS06055 - peroxiredoxin, at 1,156,960 to 1,157,613
_RS06055
Position (kb)
1155
1156
1157 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1155.033 kb on - strand at 1155.034 kb on + strand at 1155.077 kb on + strand at 1155.077 kb on + strand at 1155.086 kb on - strand at 1155.086 kb on - strand at 1155.197 kb on + strand at 1155.197 kb on + strand at 1155.209 kb on + strand at 1155.209 kb on + strand at 1155.209 kb on + strand at 1155.243 kb on + strand at 1155.249 kb on - strand at 1155.250 kb on + strand at 1155.250 kb on + strand at 1155.250 kb on + strand at 1155.253 kb on - strand at 1155.372 kb on + strand, within MMP_RS06045 at 1155.375 kb on + strand, within MMP_RS06045 at 1155.420 kb on + strand, within MMP_RS06045 at 1155.483 kb on + strand, within MMP_RS06045 at 1155.488 kb on + strand, within MMP_RS06045 at 1155.538 kb on - strand, within MMP_RS06045 at 1155.620 kb on + strand, within MMP_RS06045 at 1155.620 kb on + strand, within MMP_RS06045 at 1155.682 kb on - strand, within MMP_RS06045 at 1155.689 kb on - strand, within MMP_RS06045 at 1155.700 kb on + strand, within MMP_RS06045 at 1155.700 kb on + strand, within MMP_RS06045 at 1155.703 kb on + strand, within MMP_RS06045 at 1155.713 kb on + strand, within MMP_RS06045 at 1155.713 kb on + strand, within MMP_RS06045 at 1155.767 kb on + strand at 1155.798 kb on + strand at 1155.825 kb on - strand at 1155.961 kb on - strand at 1155.997 kb on + strand at 1156.001 kb on + strand at 1156.001 kb on + strand at 1156.001 kb on + strand at 1156.001 kb on + strand at 1156.042 kb on - strand, within MMP_RS06050 at 1156.043 kb on + strand, within MMP_RS06050 at 1156.075 kb on + strand, within MMP_RS06050 at 1156.137 kb on - strand, within MMP_RS06050 at 1156.347 kb on - strand, within MMP_RS06050 at 1156.348 kb on + strand, within MMP_RS06050 at 1156.350 kb on - strand, within MMP_RS06050 at 1156.421 kb on + strand, within MMP_RS06050 at 1156.455 kb on - strand, within MMP_RS06050 at 1156.651 kb on - strand, within MMP_RS06050 at 1156.652 kb on + strand, within MMP_RS06050 at 1156.781 kb on - strand at 1156.815 kb on - strand at 1156.816 kb on + strand at 1156.820 kb on + strand at 1156.820 kb on + strand at 1156.902 kb on - strand at 1156.902 kb on - strand at 1156.903 kb on + strand at 1156.904 kb on - strand at 1156.904 kb on - strand at 1156.905 kb on + strand at 1156.905 kb on + strand at 1156.905 kb on + strand at 1156.905 kb on + strand at 1156.906 kb on - strand at 1156.906 kb on - strand at 1156.927 kb on - strand at 1156.929 kb on - strand at 1156.930 kb on + strand at 1156.934 kb on + strand at 1156.934 kb on + strand at 1156.964 kb on - strand at 1157.035 kb on - strand, within MMP_RS06055 at 1157.035 kb on - strand, within MMP_RS06055 at 1157.038 kb on + strand, within MMP_RS06055 at 1157.064 kb on + strand, within MMP_RS06055 at 1157.213 kb on - strand, within MMP_RS06055 at 1157.238 kb on + strand, within MMP_RS06055 at 1157.337 kb on + strand, within MMP_RS06055 at 1157.397 kb on - strand, within MMP_RS06055 at 1157.603 kb on - strand at 1157.702 kb on - strand at 1157.703 kb on + strand at 1157.706 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 10mM L-Citrulline remove 1,155,033 - -1.1 1,155,034 + -0.4 1,155,077 + -0.9 1,155,077 + -0.6 1,155,086 - -2.5 1,155,086 - -2.8 1,155,197 + -0.1 1,155,197 + -0.2 1,155,209 + +0.1 1,155,209 + +0.6 1,155,209 + -0.9 1,155,243 + +0.3 1,155,249 - +0.5 1,155,250 + +0.9 1,155,250 + +0.2 1,155,250 + -0.0 1,155,253 - +1.2 1,155,372 + MMP_RS06045 0.21 +1.3 1,155,375 + MMP_RS06045 0.21 -0.0 1,155,420 + MMP_RS06045 0.30 +0.0 1,155,483 + MMP_RS06045 0.41 +0.6 1,155,488 + MMP_RS06045 0.42 +1.7 1,155,538 - MMP_RS06045 0.51 +0.4 1,155,620 + MMP_RS06045 0.66 +0.8 1,155,620 + MMP_RS06045 0.66 +0.0 1,155,682 - MMP_RS06045 0.77 +0.3 1,155,689 - MMP_RS06045 0.78 +0.1 1,155,700 + MMP_RS06045 0.80 -0.3 1,155,700 + MMP_RS06045 0.80 -0.1 1,155,703 + MMP_RS06045 0.81 -0.3 1,155,713 + MMP_RS06045 0.83 +0.9 1,155,713 + MMP_RS06045 0.83 -0.2 1,155,767 + +0.8 1,155,798 + +0.3 1,155,825 - +0.0 1,155,961 - -0.1 1,155,997 + +0.6 1,156,001 + +1.1 1,156,001 + -0.4 1,156,001 + +1.7 1,156,001 + +1.0 1,156,042 - MMP_RS06050 0.14 +0.4 1,156,043 + MMP_RS06050 0.14 +1.6 1,156,075 + MMP_RS06050 0.18 -0.0 1,156,137 - MMP_RS06050 0.25 -0.2 1,156,347 - MMP_RS06050 0.51 +0.6 1,156,348 + MMP_RS06050 0.51 -0.7 1,156,350 - MMP_RS06050 0.52 +1.4 1,156,421 + MMP_RS06050 0.60 +0.7 1,156,455 - MMP_RS06050 0.65 -0.5 1,156,651 - MMP_RS06050 0.89 +1.0 1,156,652 + MMP_RS06050 0.89 +0.2 1,156,781 - +0.5 1,156,815 - +1.5 1,156,816 + +0.9 1,156,820 + -0.4 1,156,820 + +2.2 1,156,902 - +0.6 1,156,902 - +0.3 1,156,903 + +0.3 1,156,904 - -0.7 1,156,904 - -0.3 1,156,905 + +0.4 1,156,905 + -0.2 1,156,905 + -1.2 1,156,905 + -1.2 1,156,906 - +0.2 1,156,906 - +0.2 1,156,927 - -0.0 1,156,929 - +0.6 1,156,930 + +0.8 1,156,934 + +0.4 1,156,934 + +0.1 1,156,964 - -0.1 1,157,035 - MMP_RS06055 0.11 -1.9 1,157,035 - MMP_RS06055 0.11 -0.7 1,157,038 + MMP_RS06055 0.12 -0.5 1,157,064 + MMP_RS06055 0.16 +0.3 1,157,213 - MMP_RS06055 0.39 +1.2 1,157,238 + MMP_RS06055 0.43 +0.5 1,157,337 + MMP_RS06055 0.58 +0.3 1,157,397 - MMP_RS06055 0.67 +0.1 1,157,603 - -0.9 1,157,702 - +0.1 1,157,703 + -0.5 1,157,706 - +0.9
Or see this region's nucleotide sequence