Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS06230

Experiment: Planktonic; Day2; SGW; pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Planktonic; Day2; SGW; pH7
1,333,075	+		LRK54_RS06220	0.75	-0.8
1,333,075	+		LRK54_RS06220	0.75	-0.7
1,333,075	+		LRK54_RS06220	0.75	-0.1
1,333,075	+		LRK54_RS06220	0.75	+0.4
1,333,075	+		LRK54_RS06220	0.75	+0.4
1,333,076	-		LRK54_RS06220	0.75	-1.7
1,333,076	-		LRK54_RS06220	0.75	-1.9
1,333,076	-		LRK54_RS06220	0.75	-1.5
1,333,076	-		LRK54_RS06220	0.75	+0.2
1,333,076	-		LRK54_RS06220	0.75	-2.0
1,333,076	-		LRK54_RS06220	0.75	-0.9
1,333,076	-		LRK54_RS06220	0.75	-0.2
1,333,076	-		LRK54_RS06220	0.75	+0.1
1,333,076	-		LRK54_RS06220	0.75	+0.4
1,333,076	-		LRK54_RS06220	0.75	-1.3
1,333,076	-		LRK54_RS06220	0.75	+0.9
1,333,076	-		LRK54_RS06220	0.75	-1.8
1,333,076	-		LRK54_RS06220	0.75	+0.5
1,333,076	-		LRK54_RS06220	0.75	-1.1
1,333,076	-		LRK54_RS06220	0.75	-0.9
1,333,286	+		LRK54_RS06225	0.31	-0.3
1,333,286	+		LRK54_RS06225	0.31	-0.4
1,333,286	+		LRK54_RS06225	0.31	+1.3
1,333,286	+		LRK54_RS06225	0.31	+4.1
1,333,286	+		LRK54_RS06225	0.31	-0.6
1,333,287	-		LRK54_RS06225	0.31	+0.7
1,333,287	-		LRK54_RS06225	0.31	-0.2
1,333,459	+				-0.3
1,333,460	-				-1.8
1,333,460	-				-1.3
1,333,460	-				-0.6
1,333,564	+				-1.0
1,333,564	+				-2.1
1,333,564	+				+1.5
1,333,564	+				-2.0
1,333,564	+				-0.9
1,333,564	+				+0.2
1,333,564	+				+0.6
1,333,564	+				-1.0
1,333,564	+				-2.3
1,333,564	+				+0.7
1,333,564	+				-1.9
1,333,564	+				+4.1
1,333,564	+				-0.1
1,333,564	+				+2.3
1,333,564	+				-1.4
1,333,564	+				-0.4
1,333,564	+				-0.4
1,333,564	+				-1.9
1,333,565	-				-2.0
1,333,565	-				+0.0
1,333,565	-				+0.4
1,333,565	-				-1.7
1,333,565	-				-1.0
1,333,565	-				-1.0
1,333,565	-				+0.6
1,333,565	-				-1.5
1,333,565	-				-0.1
1,333,565	-				-1.0
1,333,785	+				+0.9
1,333,786	-				-2.2
1,333,786	-				-0.3
1,333,839	+				-0.5
1,333,839	+				-0.8
1,333,840	-				-1.5
1,333,840	-				-0.1
1,333,840	-				-0.2
1,333,998	+		LRK54_RS06230	0.19	-0.3
1,333,998	+		LRK54_RS06230	0.19	+0.3
1,333,998	+		LRK54_RS06230	0.19	+0.2
1,333,998	+		LRK54_RS06230	0.19	-0.6
1,333,998	+		LRK54_RS06230	0.19	-0.0
1,333,998	+		LRK54_RS06230	0.19	+0.3
1,333,998	+		LRK54_RS06230	0.19	-0.5
1,333,998	+		LRK54_RS06230	0.19	+1.3
1,333,998	+		LRK54_RS06230	0.19	-1.6
1,333,998	+		LRK54_RS06230	0.19	+0.0
1,333,998	+		LRK54_RS06230	0.19	-0.9
1,333,998	+		LRK54_RS06230	0.19	+0.5
1,333,999	-		LRK54_RS06230	0.19	+1.1
1,333,999	-		LRK54_RS06230	0.19	+0.9
1,333,999	-		LRK54_RS06230	0.19	-2.4
1,333,999	-		LRK54_RS06230	0.19	+0.7
1,333,999	-		LRK54_RS06230	0.19	-3.0
1,333,999	-		LRK54_RS06230	0.19	-2.0
1,333,999	-		LRK54_RS06230	0.19	+1.7
1,333,999	-		LRK54_RS06230	0.19	-1.4
1,334,049	+		LRK54_RS06230	0.22	-0.0
1,334,049	+		LRK54_RS06230	0.22	+2.5
1,334,049	+		LRK54_RS06230	0.22	+0.9
1,334,049	+		LRK54_RS06230	0.22	-1.0
1,334,049	+		LRK54_RS06230	0.22	-2.4
1,334,049	+		LRK54_RS06230	0.22	-2.9
1,334,049	+		LRK54_RS06230	0.22	-2.4
1,334,049	+		LRK54_RS06230	0.22	+0.2
1,334,049	+		LRK54_RS06230	0.22	-0.6
1,334,049	+		LRK54_RS06230	0.22	+0.5
1,334,049	+		LRK54_RS06230	0.22	-1.9
1,334,049	+		LRK54_RS06230	0.22	-2.4
1,334,049	+		LRK54_RS06230	0.22	+0.3
1,334,049	+		LRK54_RS06230	0.22	+1.1
1,334,049	+		LRK54_RS06230	0.22	+0.5
1,334,049	+		LRK54_RS06230	0.22	-1.2
1,334,049	+		LRK54_RS06230	0.22	-2.3
1,334,049	+		LRK54_RS06230	0.22	-1.8
1,334,049	+		LRK54_RS06230	0.22	-1.3
1,334,049	+		LRK54_RS06230	0.22	+3.7
1,334,049	+		LRK54_RS06230	0.22	-1.0
1,334,049	+		LRK54_RS06230	0.22	-0.3
1,334,049	+		LRK54_RS06230	0.22	-1.8
1,334,049	+		LRK54_RS06230	0.22	-0.5
1,334,050	-		LRK54_RS06230	0.22	-2.3
1,334,050	-		LRK54_RS06230	0.22	-0.0
1,334,050	-		LRK54_RS06230	0.22	-2.0
1,334,050	-		LRK54_RS06230	0.22	-0.1
1,334,050	-		LRK54_RS06230	0.22	-0.6
1,334,050	-		LRK54_RS06230	0.22	-0.5
1,334,050	-		LRK54_RS06230	0.22	+0.4
1,334,050	-		LRK54_RS06230	0.22	-0.2
1,334,050	-		LRK54_RS06230	0.22	-0.3
1,334,050	-		LRK54_RS06230	0.22	+1.5
1,334,050	-		LRK54_RS06230	0.22	-0.7
1,334,050	-		LRK54_RS06230	0.22	+0.1
1,334,050	-		LRK54_RS06230	0.22	+0.1
1,334,050	-		LRK54_RS06230	0.22	-0.2
1,334,050	-		LRK54_RS06230	0.22	+1.1
1,334,050	-		LRK54_RS06230	0.22	+4.1
1,334,050	-		LRK54_RS06230	0.22	-1.0
1,334,050	-		LRK54_RS06230	0.22	+0.6
1,334,050	-		LRK54_RS06230	0.22	-0.1
1,334,050	-		LRK54_RS06230	0.22	+0.1
1,334,050	-		LRK54_RS06230	0.22	-1.0
1,334,050	-		LRK54_RS06230	0.22	-0.1
1,334,059	-		LRK54_RS06230	0.23	-2.9
1,334,059	-		LRK54_RS06230	0.23	-2.6
1,334,059	-		LRK54_RS06230	0.23	-1.2
1,334,214	+		LRK54_RS06230	0.32	-0.3
1,334,214	+		LRK54_RS06230	0.32	-0.5
1,334,214	+		LRK54_RS06230	0.32	+0.7
1,334,215	-		LRK54_RS06230	0.32	+0.4
1,334,298	+		LRK54_RS06230	0.37	+0.9
1,334,298	+		LRK54_RS06230	0.37	+3.9
1,334,298	+		LRK54_RS06230	0.37	+0.5
1,334,298	+		LRK54_RS06230	0.37	+0.7
1,334,298	+		LRK54_RS06230	0.37	-0.6
1,334,298	+		LRK54_RS06230	0.37	+0.9
1,334,298	+		LRK54_RS06230	0.37	-2.3
1,334,298	+		LRK54_RS06230	0.37	-0.2
1,334,298	+		LRK54_RS06230	0.37	-0.9
1,334,298	+		LRK54_RS06230	0.37	+0.4
1,334,298	+		LRK54_RS06230	0.37	+0.4
1,334,298	+		LRK54_RS06230	0.37	+0.2
1,334,298	+		LRK54_RS06230	0.37	+1.5
1,334,299	-		LRK54_RS06230	0.37	-1.6
1,334,299	-		LRK54_RS06230	0.37	-1.0
1,334,299	-		LRK54_RS06230	0.37	-1.3
1,334,299	-		LRK54_RS06230	0.37	-0.1
1,334,299	-		LRK54_RS06230	0.37	-0.3
1,334,299	-		LRK54_RS06230	0.37	+0.0
1,334,299	-		LRK54_RS06230	0.37	+0.1
1,334,385	+		LRK54_RS06230	0.42	-0.5
1,334,385	+		LRK54_RS06230	0.42	-0.8
1,334,385	+		LRK54_RS06230	0.42	-0.6
1,334,385	+		LRK54_RS06230	0.42	-0.2
1,334,385	+		LRK54_RS06230	0.42	-1.2
1,334,385	+		LRK54_RS06230	0.42	-0.9
1,334,385	+		LRK54_RS06230	0.42	+2.5
1,334,385	+		LRK54_RS06230	0.42	-0.8
1,334,386	-		LRK54_RS06230	0.42	-0.1
1,334,386	-		LRK54_RS06230	0.42	-1.1
1,334,386	-		LRK54_RS06230	0.42	+1.7
1,334,386	-		LRK54_RS06230	0.42	-1.8
1,334,386	-		LRK54_RS06230	0.42	-0.3
1,334,386	-		LRK54_RS06230	0.42	-0.7
1,334,386	-		LRK54_RS06230	0.42	-0.6
1,334,386	-		LRK54_RS06230	0.42	-0.1
1,334,386	-		LRK54_RS06230	0.42	+0.1
1,334,386	-		LRK54_RS06230	0.42	+2.1
1,334,388	+		LRK54_RS06230	0.43	-3.1
1,334,388	+		LRK54_RS06230	0.43	+1.7
1,334,388	+		LRK54_RS06230	0.43	+1.1
1,334,388	+		LRK54_RS06230	0.43	+2.1
1,334,388	+		LRK54_RS06230	0.43	+3.5
1,334,388	+		LRK54_RS06230	0.43	-1.4
1,334,389	-		LRK54_RS06230	0.43	-0.5
1,334,389	-		LRK54_RS06230	0.43	+0.7
1,334,389	-		LRK54_RS06230	0.43	-1.4
1,334,389	-		LRK54_RS06230	0.43	-2.5
1,334,556	+		LRK54_RS06230	0.53	-0.6
1,334,556	+		LRK54_RS06230	0.53	-0.2
1,334,556	+		LRK54_RS06230	0.53	-1.2
1,334,556	+		LRK54_RS06230	0.53	+0.8
1,334,556	+		LRK54_RS06230	0.53	-0.2
1,334,556	+		LRK54_RS06230	0.53	+0.4
1,334,556	+		LRK54_RS06230	0.53	-0.7
1,334,557	-		LRK54_RS06230	0.53	-1.0
1,334,557	-		LRK54_RS06230	0.53	+1.6
1,334,557	-		LRK54_RS06230	0.53	+0.0
1,334,557	-		LRK54_RS06230	0.53	+3.1
1,334,557	-		LRK54_RS06230	0.53	-1.0
1,334,557	-		LRK54_RS06230	0.53	-0.9
1,334,557	-		LRK54_RS06230	0.53	-0.1
1,334,557	-		LRK54_RS06230	0.53	-1.4
1,334,557	-		LRK54_RS06230	0.53	-0.5
1,334,557	-		LRK54_RS06230	0.53	-1.8
1,334,558	-		LRK54_RS06230	0.53	-0.0
1,334,604	+		LRK54_RS06230	0.56	-2.3
1,334,605	-		LRK54_RS06230	0.56	+1.1
1,334,605	-		LRK54_RS06230	0.56	+2.3
1,334,781	+		LRK54_RS06230	0.66	+1.0
1,334,781	+		LRK54_RS06230	0.66	-0.0
1,334,781	+		LRK54_RS06230	0.66	-1.3
1,334,781	+		LRK54_RS06230	0.66	+0.5
1,334,781	+		LRK54_RS06230	0.66	+1.7
1,334,781	+		LRK54_RS06230	0.66	-2.1
1,334,782	-		LRK54_RS06230	0.67	-2.9
1,334,782	-		LRK54_RS06230	0.67	+0.2
1,334,782	-		LRK54_RS06230	0.67	-0.4
1,334,782	-		LRK54_RS06230	0.67	+0.1
1,334,782	-		LRK54_RS06230	0.67	-0.7
1,334,784	+		LRK54_RS06230	0.67	+0.8
1,334,784	+		LRK54_RS06230	0.67	-0.4
1,334,784	+		LRK54_RS06230	0.67	+1.3
1,334,785	-		LRK54_RS06230	0.67	-1.8
1,334,785	-		LRK54_RS06230	0.67	+0.2
1,334,785	-		LRK54_RS06230	0.67	-0.5
1,334,938	-		LRK54_RS06230	0.76	+2.5
1,334,938	-		LRK54_RS06230	0.76	-0.3
1,335,060	+		LRK54_RS06230	0.83	-0.7
1,335,060	+		LRK54_RS06230	0.83	-0.2
1,335,060	+		LRK54_RS06230	0.83	-2.6
1,335,060	+		LRK54_RS06230	0.83	-0.9
1,335,060	+		LRK54_RS06230	0.83	-0.6
1,335,060	+		LRK54_RS06230	0.83	-1.2
1,335,060	+		LRK54_RS06230	0.83	-1.0
1,335,060	+		LRK54_RS06230	0.83	-0.2
1,335,060	+		LRK54_RS06230	0.83	-2.4
1,335,060	+		LRK54_RS06230	0.83	-1.3
1,335,060	+		LRK54_RS06230	0.83	-0.9
1,335,060	+		LRK54_RS06230	0.83	-0.3
1,335,060	+		LRK54_RS06230	0.83	-1.5
1,335,060	+		LRK54_RS06230	0.83	-1.3
1,335,060	+		LRK54_RS06230	0.83	-0.7
1,335,060	+		LRK54_RS06230	0.83	+0.7
1,335,060	+		LRK54_RS06230	0.83	-1.1
1,335,060	+		LRK54_RS06230	0.83	+0.5
1,335,060	+		LRK54_RS06230	0.83	+0.1
1,335,061	-		LRK54_RS06230	0.84	-1.2
1,335,061	-		LRK54_RS06230	0.84	+0.6
1,335,061	-		LRK54_RS06230	0.84	-2.9
1,335,061	-		LRK54_RS06230	0.84	+0.1
1,335,061	-		LRK54_RS06230	0.84	-0.1
1,335,061	-		LRK54_RS06230	0.84	+1.3
1,335,061	-		LRK54_RS06230	0.84	-1.3
1,335,061	-		LRK54_RS06230	0.84	+0.9
1,335,061	-		LRK54_RS06230	0.84	+1.1
1,335,165	+		LRK54_RS06230	0.90	-1.3
1,335,165	+		LRK54_RS06230	0.90	-0.0
1,335,165	+		LRK54_RS06230	0.90	-1.2
1,335,165	+		LRK54_RS06230	0.90	-0.1
1,335,165	+		LRK54_RS06230	0.90	+0.7
1,335,166	-		LRK54_RS06230	0.90	-0.5
1,335,166	-		LRK54_RS06230	0.90	+0.4
1,335,166	-		LRK54_RS06230	0.90	+0.6
1,335,166	-		LRK54_RS06230	0.90	+0.2
1,335,166	-		LRK54_RS06230	0.90	-1.0
1,335,166	-		LRK54_RS06230	0.90	-2.6
1,335,166	-		LRK54_RS06230	0.90	-1.2
1,335,166	-		LRK54_RS06230	0.90	-2.6
1,335,166	-		LRK54_RS06230	0.90	-0.4
1,335,405	+				-1.9
1,335,405	+				-0.6
1,335,405	+				-0.5
1,335,405	+				-1.9
1,335,405	+				+0.7
1,335,405	+				+1.5
1,335,405	+				-2.0
1,335,405	+				-1.9
1,335,405	+				-0.1
1,335,405	+				-1.4
1,335,406	-				+0.4
1,335,406	-				-1.0
1,335,406	-				-1.0
1,335,406	-				-1.6
1,335,406	-				-0.3
1,335,406	-				-0.3
1,335,406	-				-1.1
1,335,406	-				+0.4
1,335,466	+				+0.2
1,335,466	+				-2.4
1,335,466	+				+1.2
1,335,467	-				+3.1
1,335,467	-				-0.6
1,335,467	-				+1.1
1,335,467	-				-0.8
1,335,467	-				-1.4
1,335,467	-				-0.6
1,335,467	-				-2.1
1,335,467	-				+1.7
1,335,467	-				+0.5
1,335,467	-				+0.1
1,335,724	+		LRK54_RS06235	0.26	+2.1
1,335,724	+		LRK54_RS06235	0.26	-0.3
1,335,724	+		LRK54_RS06235	0.26	+0.3
1,335,787	+		LRK54_RS06235	0.36	-0.0
1,335,787	+		LRK54_RS06235	0.36	+1.1
1,335,787	+		LRK54_RS06235	0.36	+0.9
1,335,787	+		LRK54_RS06235	0.36	-0.4
1,335,787	+		LRK54_RS06235	0.36	+1.6
1,335,788	-		LRK54_RS06235	0.36	-1.0
1,335,788	-		LRK54_RS06235	0.36	+0.5
1,335,788	-		LRK54_RS06235	0.36	-0.7
1,335,788	-		LRK54_RS06235	0.36	+0.9
1,335,901	+		LRK54_RS06235	0.53	+1.7
1,335,901	+		LRK54_RS06235	0.53	-1.5
1,335,901	+		LRK54_RS06235	0.53	+0.4
1,335,901	+		LRK54_RS06235	0.53	-0.7
1,335,901	+		LRK54_RS06235	0.53	-0.7
1,335,901	+		LRK54_RS06235	0.53	-0.8
1,335,901	+		LRK54_RS06235	0.53	-0.3
1,335,902	-		LRK54_RS06235	0.53	+3.3
1,335,902	-		LRK54_RS06235	0.53	+1.6
1,335,902	-		LRK54_RS06235	0.53	-0.4
1,335,902	-		LRK54_RS06235	0.53	-0.6
1,335,902	-		LRK54_RS06235	0.53	-1.1
1,335,902	-		LRK54_RS06235	0.53	+0.7
1,335,902	-		LRK54_RS06235	0.53	+1.5
1,335,902	-		LRK54_RS06235	0.53	+0.3
1,335,902	-		LRK54_RS06235	0.53	-2.0
1,335,902	-		LRK54_RS06235	0.53	-0.2
1,335,902	-		LRK54_RS06235	0.53	+1.1
1,335,902	-		LRK54_RS06235	0.53	+0.9
1,335,919	+		LRK54_RS06235	0.56	-0.0
1,335,919	+		LRK54_RS06235	0.56	-0.2
1,335,920	-		LRK54_RS06235	0.56	-2.0
1,336,000	+		LRK54_RS06235	0.68	-1.1
1,336,000	+		LRK54_RS06235	0.68	-1.6
1,336,000	+		LRK54_RS06235	0.68	-1.8
1,336,000	+		LRK54_RS06235	0.68	-0.4
1,336,000	+		LRK54_RS06235	0.68	-0.1
1,336,000	+		LRK54_RS06235	0.68	-1.4
1,336,000	+		LRK54_RS06235	0.68	-1.0
1,336,000	+		LRK54_RS06235	0.68	-1.6
1,336,001	-		LRK54_RS06235	0.68	+2.3
1,336,001	-		LRK54_RS06235	0.68	+0.5
1,336,001	-		LRK54_RS06235	0.68	-2.0
1,336,001	-		LRK54_RS06235	0.68	-1.7
1,336,001	-		LRK54_RS06235	0.68	+1.5
1,336,001	-		LRK54_RS06235	0.68	+0.2
1,336,048	+		LRK54_RS06235	0.75	-0.1
1,336,048	+		LRK54_RS06235	0.75	-1.6
1,336,048	+		LRK54_RS06235	0.75	-2.0
1,336,048	+		LRK54_RS06235	0.75	+2.5
1,336,048	+		LRK54_RS06235	0.75	+2.5
1,336,048	+		LRK54_RS06235	0.75	-1.1
1,336,049	-		LRK54_RS06235	0.75	+0.2
1,336,049	-		LRK54_RS06235	0.75	+1.3
1,336,049	-		LRK54_RS06235	0.75	+3.3
1,336,049	-		LRK54_RS06235	0.75	+0.1
1,336,049	-		LRK54_RS06235	0.75	+1.1
1,336,049	-		LRK54_RS06235	0.75	-0.5
1,336,049	-		LRK54_RS06235	0.75	+0.9
1,336,049	-		LRK54_RS06235	0.75	+0.5
1,336,049	-		LRK54_RS06235	0.75	-1.0
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1,336,114	+		LRK54_RS06235	0.85	+0.1
1,336,114	+		LRK54_RS06235	0.85	+0.3
1,336,114	+		LRK54_RS06235	0.85	-0.3
1,336,114	+		LRK54_RS06235	0.85	+4.1
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1,336,115	-		LRK54_RS06235	0.85	-2.3
1,336,115	-		LRK54_RS06235	0.85	+0.0
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1,336,115	-		LRK54_RS06235	0.85	+0.2
1,336,115	-		LRK54_RS06235	0.85	+1.1
1,336,115	-		LRK54_RS06235	0.85	+0.6
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1,336,115	-		LRK54_RS06235	0.85	-0.3
1,336,115	-		LRK54_RS06235	0.85	-1.7
1,336,115	-		LRK54_RS06235	0.85	+1.3
1,336,126	+		LRK54_RS06235	0.87	-1.8
1,336,126	+		LRK54_RS06235	0.87	+0.3
1,336,126	+		LRK54_RS06235	0.87	+0.1
1,336,126	+		LRK54_RS06235	0.87	-0.1
1,336,126	+		LRK54_RS06235	0.87	-0.2
1,336,126	+		LRK54_RS06235	0.87	+1.3
1,336,126	+		LRK54_RS06235	0.87	-2.2
1,336,126	+		LRK54_RS06235	0.87	-1.1
1,336,126	+		LRK54_RS06235	0.87	+0.1
1,336,126	+		LRK54_RS06235	0.87	-0.6
1,336,126	+		LRK54_RS06235	0.87	+0.5
1,336,126	+		LRK54_RS06235	0.87	+0.9
1,336,127	-		LRK54_RS06235	0.87	+2.5
1,336,127	-		LRK54_RS06235	0.87	-0.5
1,336,127	-		LRK54_RS06235	0.87	-0.7
1,336,127	-		LRK54_RS06235	0.87	-1.2
1,336,127	-		LRK54_RS06235	0.87	+1.1
1,336,127	-		LRK54_RS06235	0.87	-0.3
1,336,127	-		LRK54_RS06235	0.87	-0.3
1,336,127	-		LRK54_RS06235	0.87	+0.6
1,336,127	-		LRK54_RS06235	0.87	+1.1
1,336,127	-		LRK54_RS06235	0.87	-0.1
1,336,129	+		LRK54_RS06235	0.87	+0.2
1,336,129	+		LRK54_RS06235	0.87	-0.3
1,336,129	+		LRK54_RS06235	0.87	+1.3
1,336,130	-		LRK54_RS06235	0.87	+1.3
1,336,130	-		LRK54_RS06235	0.87	+0.7
1,336,130	-		LRK54_RS06235	0.87	+0.1
1,336,162	+				-1.2
1,336,162	+				-0.2
1,336,162	+				-2.0
1,336,163	-				-0.8