Experiment: H2 N-free with 10mM L-Valine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS02270 and MMP_RS02275 are separated by 89 nucleotides MMP_RS02275 and MMP_RS02280 are separated by 259 nucleotides MMP_RS02280 and MMP_RS02285 are separated by 54 nucleotides
MMP_RS02270: MMP_RS02270 - replication factor C small subunit, at 428,224 to 429,171
_RS02270
MMP_RS02275: MMP_RS02275 - Ni-sirohydrochlorin a c-diamide reductive cyclase catalytic subunit, at 429,261 to 430,361
_RS02275
MMP_RS02280: MMP_RS02280 - DUF211 domain-containing protein, at 430,621 to 430,914
_RS02280
MMP_RS02285: MMP_RS02285 - RNase P subunit p30 family protein, at 430,969 to 431,667
_RS02285
Position (kb) 429
430
431 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 428.261 kb on + strand at 428.384 kb on + strand at 428.387 kb on + strand at 428.427 kb on + strand at 428.606 kb on - strand at 429.090 kb on - strand at 429.193 kb on - strand at 429.209 kb on - strand at 429.234 kb on - strand at 429.235 kb on + strand at 429.242 kb on - strand at 429.273 kb on + strand at 429.385 kb on - strand at 429.386 kb on + strand at 429.829 kb on - strand at 430.009 kb on + strand at 430.018 kb on + strand at 430.021 kb on + strand at 430.155 kb on - strand at 430.378 kb on + strand at 430.405 kb on - strand at 430.413 kb on + strand at 430.458 kb on + strand at 430.459 kb on - strand at 430.485 kb on + strand at 430.506 kb on - strand at 430.506 kb on - strand at 430.509 kb on + strand at 430.510 kb on - strand at 430.511 kb on + strand at 430.511 kb on + strand at 430.516 kb on + strand at 430.530 kb on + strand at 430.530 kb on + strand at 430.531 kb on - strand at 430.532 kb on + strand at 430.532 kb on + strand at 430.532 kb on + strand at 430.535 kb on - strand at 430.537 kb on - strand at 430.542 kb on + strand at 430.542 kb on + strand at 430.544 kb on - strand at 430.545 kb on + strand at 430.602 kb on - strand at 430.602 kb on - strand at 430.603 kb on + strand at 430.819 kb on + strand, within MMP_RS02280 at 430.906 kb on + strand at 430.906 kb on + strand at 430.906 kb on + strand at 430.909 kb on - strand at 430.938 kb on - strand at 430.941 kb on - strand at 431.138 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 10mM L-Valine remove 428,261 + -2.8 428,384 + -2.6 428,387 + +1.0 428,427 + +0.0 428,606 - -1.1 429,090 - +0.0 429,193 - -0.6 429,209 - -2.4 429,234 - -0.1 429,235 + +1.5 429,242 - -0.1 429,273 + +1.2 429,385 - -2.8 429,386 + -1.1 429,829 - -0.5 430,009 + -1.6 430,018 + -3.2 430,021 + -3.8 430,155 - -1.3 430,378 + -2.8 430,405 - -0.5 430,413 + +1.1 430,458 + -0.6 430,459 - -0.2 430,485 + -1.1 430,506 - +0.8 430,506 - +0.4 430,509 + +0.9 430,510 - -0.0 430,511 + +1.2 430,511 + -0.1 430,516 + -0.3 430,530 + +0.6 430,530 + +0.4 430,531 - +1.2 430,532 + +0.7 430,532 + +0.4 430,532 + +0.7 430,535 - +3.1 430,537 - +0.3 430,542 + +1.3 430,542 + +0.3 430,544 - -2.6 430,545 + -0.5 430,602 - -1.7 430,602 - -0.6 430,603 + +1.1 430,819 + MMP_RS02280 0.67 -0.0 430,906 + +1.3 430,906 + -1.1 430,906 + -0.2 430,909 - -1.0 430,938 - -5.1 430,941 - -1.3 431,138 + -2.3
Or see this region's nucleotide sequence