Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05010

Experiment: H2 N-free with 10mM L-Threonine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMMP_RS05005 and MMP_RS05010 are separated by 256 nucleotidesMMP_RS05010 and MMP_RS05015 are separated by 18 nucleotides MMP_RS05005: MMP_RS05005 - uroporphyrinogen-III C-methyltransferase, at 953,174 to 953,893 _RS05005 MMP_RS05010: MMP_RS05010 - KEOPS complex subunit Cgi121, at 954,150 to 954,581 _RS05010 MMP_RS05015: MMP_RS05015 - histidinol dehydrogenase, at 954,600 to 955,874 _RS05015 Position (kb) 954 955Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 953.160 kb on + strandat 953.175 kb on - strandat 953.175 kb on - strandat 953.186 kb on - strandat 953.186 kb on - strandat 953.187 kb on + strandat 953.187 kb on + strandat 953.206 kb on - strandat 953.393 kb on - strandat 953.393 kb on - strandat 953.574 kb on + strandat 953.588 kb on - strandat 953.924 kb on - strandat 953.925 kb on + strandat 953.925 kb on + strandat 953.934 kb on - strandat 953.934 kb on - strandat 953.935 kb on + strandat 953.963 kb on + strandat 953.967 kb on + strandat 953.968 kb on - strandat 953.969 kb on + strandat 953.988 kb on - strandat 953.988 kb on - strandat 953.989 kb on + strandat 954.022 kb on + strandat 954.046 kb on + strandat 954.049 kb on - strandat 954.050 kb on + strandat 954.050 kb on + strandat 954.052 kb on + strandat 954.061 kb on - strandat 954.069 kb on - strandat 954.069 kb on - strandat 954.071 kb on - strandat 954.074 kb on - strandat 954.080 kb on + strandat 954.138 kb on + strandat 954.157 kb on - strandat 954.268 kb on - strandat 954.269 kb on + strandat 954.271 kb on + strandat 954.294 kb on + strandat 954.322 kb on - strandat 954.650 kb on + strandat 954.791 kb on + strandat 954.839 kb on + strandat 954.979 kb on + strandat 955.060 kb on - strandat 955.394 kb on - strandat 955.394 kb on - strandat 955.401 kb on + strandat 955.554 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction H2 N-free with 10mM L-Threonine
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953,160 + -2.0
953,175 - -1.7
953,175 - -1.1
953,186 - -0.2
953,186 - -3.4
953,187 + +1.1
953,187 + -2.7
953,206 - -2.9
953,393 - -0.3
953,393 - +0.2
953,574 + +0.3
953,588 - -0.1
953,924 - +0.8
953,925 + -1.8
953,925 + -2.6
953,934 - -0.6
953,934 - -0.5
953,935 + +0.7
953,963 + -1.7
953,967 + -1.8
953,968 - -0.3
953,969 + +0.7
953,988 - +1.3
953,988 - +0.2
953,989 + +1.8
954,022 + +0.9
954,046 + -0.1
954,049 - -3.1
954,050 + +1.0
954,050 + -2.0
954,052 + +0.2
954,061 - -1.6
954,069 - +0.9
954,069 - +1.5
954,071 - +0.3
954,074 - -0.1
954,080 + +0.7
954,138 + -2.2
954,157 - -1.1
954,268 - -2.3
954,269 + -2.1
954,271 + -2.3
954,294 + -0.1
954,322 - -0.2
954,650 + +0.9
954,791 + +0.9
954,839 + -1.3
954,979 + -1.8
955,060 - -1.3
955,394 - -2.2
955,394 - +0.1
955,401 + -0.4
955,554 - -0.2

Or see this region's nucleotide sequence