Strain Fitness in Methanococcus maripaludis S2 around MMP_RS02155

Experiment: H2 N-free with 10mM L-Glutamic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMMP_RS02150 and MMP_RS02155 are separated by 17 nucleotidesMMP_RS02155 and MMP_RS02160 are separated by 105 nucleotidesMMP_RS02160 and MMP_RS02165 are separated by 27 nucleotides MMP_RS02150: MMP_RS02150 - hypothetical protein, at 402,378 to 403,463 _RS02150 MMP_RS02155: MMP_RS02155 - 2-phospho-L-lactate transferase, at 403,481 to 404,410 _RS02155 MMP_RS02160: MMP_RS02160 - GTP cyclohydrolase IIa, at 404,516 to 405,316 _RS02160 MMP_RS02165: MMP_RS02165 - tRNA-dihydrouridine synthase, at 405,344 to 406,114 _RS02165 Position (kb) 403 404 405Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1 2at 402.861 kb on - strandat 402.862 kb on + strandat 402.864 kb on + strandat 402.876 kb on - strandat 402.908 kb on - strandat 402.935 kb on + strandat 402.935 kb on + strandat 402.971 kb on + strandat 402.971 kb on + strandat 403.071 kb on - strandat 403.129 kb on - strandat 403.232 kb on + strandat 403.235 kb on - strandat 403.314 kb on - strandat 403.320 kb on + strandat 403.320 kb on + strandat 403.320 kb on + strandat 403.320 kb on + strandat 403.328 kb on - strandat 403.377 kb on - strandat 403.413 kb on + strandat 403.443 kb on + strandat 403.448 kb on + strandat 403.489 kb on + strandat 403.489 kb on + strandat 403.492 kb on - strandat 403.592 kb on + strandat 403.595 kb on - strandat 403.595 kb on - strandat 403.595 kb on - strandat 403.595 kb on - strandat 403.596 kb on + strandat 403.597 kb on - strandat 403.611 kb on + strandat 403.611 kb on + strandat 403.811 kb on + strandat 403.811 kb on + strandat 403.811 kb on + strandat 403.984 kb on - strandat 403.986 kb on - strandat 403.987 kb on + strandat 404.163 kb on - strandat 404.164 kb on + strandat 404.164 kb on + strandat 404.244 kb on + strandat 404.250 kb on + strandat 404.260 kb on - strandat 404.265 kb on - strandat 404.266 kb on + strandat 404.287 kb on - strandat 404.293 kb on - strandat 404.293 kb on - strandat 404.294 kb on + strandat 404.294 kb on + strandat 404.329 kb on + strandat 404.452 kb on - strandat 404.455 kb on + strandat 404.500 kb on + strandat 404.511 kb on - strandat 404.619 kb on + strandat 405.112 kb on - strandat 405.289 kb on + strandat 405.294 kb on + strandat 405.299 kb on - strandat 405.299 kb on - strandat 405.354 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction H2 N-free with 10mM L-Glutamic
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402,861 - -2.8
402,862 + -2.5
402,864 + -1.1
402,876 - -1.1
402,908 - -0.1
402,935 + -2.3
402,935 + -3.1
402,971 + -0.3
402,971 + -0.6
403,071 - -5.2
403,129 - -4.0
403,232 + -0.9
403,235 - -2.4
403,314 - -1.8
403,320 + +1.0
403,320 + -3.5
403,320 + -3.3
403,320 + -1.3
403,328 - -4.3
403,377 - -4.3
403,413 + -0.1
403,443 + +2.5
403,448 + +0.8
403,489 + -1.8
403,489 + -2.5
403,492 - -0.3
403,592 + -3.7
403,595 - -1.3
403,595 - -2.7
403,595 - -3.7
403,595 - -2.5
403,596 + -3.0
403,597 - -4.8
403,611 + -3.5
403,611 + +0.0
403,811 + -4.1
403,811 + -3.7
403,811 + -2.5
403,984 - -2.5
403,986 - -2.8
403,987 + -2.3
404,163 - -4.7
404,164 + -1.9
404,164 + -3.0
404,244 + -4.2
404,250 + -1.9
404,260 - -4.4
404,265 - -4.0
404,266 + -3.3
404,287 - -1.7
404,293 - -1.8
404,293 - -3.8
404,294 + -1.2
404,294 + -3.8
404,329 + -1.0
404,452 - -3.7
404,455 + -2.3
404,500 + -4.6
404,511 - -2.4
404,619 + -2.7
405,112 - -3.9
405,289 + -1.4
405,294 + +0.4
405,299 - -2.3
405,299 - +1.5
405,354 - -5.9

Or see this region's nucleotide sequence