Experiment: H2 N-free with 2.5mM Cytosine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS03500 and MMP_RS03505 are separated by 29 nucleotides MMP_RS03505 and MMP_RS03510 are separated by 12 nucleotides MMP_RS03510 and MMP_RS03515 are separated by 85 nucleotides MMP_RS03515 and MMP_RS03520 are separated by 9 nucleotides
MMP_RS03500: MMP_RS03500 - 30S ribosomal protein S2, at 657,133 to 657,795
_RS03500
MMP_RS03505: MMP_RS03505 - hypothetical protein, at 657,825 to 658,433
_RS03505
MMP_RS03510: MMP_RS03510 - 30S ribosomal protein S3ae, at 658,446 to 659,123
_RS03510
MMP_RS03515: MMP_RS03515 - DMT family transporter, at 659,209 to 660,099
_RS03515
MMP_RS03520: MMP_RS03520 - YwbE family protein, at 660,109 to 660,303
_RS03520
Position (kb) 658
659
660 Strain fitness (log2 ratio) -1
0
1 at 659.033 kb on - strand at 659.093 kb on + strand at 659.277 kb on + strand at 659.301 kb on - strand, within MMP_RS03515 at 659.302 kb on + strand, within MMP_RS03515 at 659.366 kb on - strand, within MMP_RS03515 at 659.404 kb on - strand, within MMP_RS03515 at 659.405 kb on + strand, within MMP_RS03515 at 659.405 kb on + strand, within MMP_RS03515 at 659.433 kb on - strand, within MMP_RS03515 at 659.440 kb on - strand, within MMP_RS03515 at 659.443 kb on - strand, within MMP_RS03515 at 659.444 kb on + strand, within MMP_RS03515 at 659.447 kb on - strand, within MMP_RS03515 at 659.465 kb on - strand, within MMP_RS03515 at 659.466 kb on + strand, within MMP_RS03515 at 659.470 kb on - strand, within MMP_RS03515 at 659.495 kb on - strand, within MMP_RS03515 at 659.660 kb on - strand, within MMP_RS03515 at 659.660 kb on - strand, within MMP_RS03515 at 659.660 kb on - strand, within MMP_RS03515 at 659.660 kb on - strand, within MMP_RS03515 at 659.660 kb on - strand, within MMP_RS03515 at 659.661 kb on + strand, within MMP_RS03515 at 659.695 kb on - strand, within MMP_RS03515 at 659.743 kb on + strand, within MMP_RS03515 at 659.751 kb on - strand, within MMP_RS03515 at 659.751 kb on - strand, within MMP_RS03515 at 659.778 kb on - strand, within MMP_RS03515 at 659.781 kb on + strand, within MMP_RS03515 at 659.897 kb on + strand, within MMP_RS03515 at 659.956 kb on - strand, within MMP_RS03515 at 659.959 kb on + strand, within MMP_RS03515 at 659.959 kb on + strand, within MMP_RS03515 at 660.015 kb on - strand at 660.027 kb on + strand at 660.058 kb on - strand at 660.098 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 2.5mM Cytosine remove 659,033 - +0.7 659,093 + -0.8 659,277 + +0.2 659,301 - MMP_RS03515 0.10 -0.8 659,302 + MMP_RS03515 0.10 -0.3 659,366 - MMP_RS03515 0.18 +0.9 659,404 - MMP_RS03515 0.22 -0.9 659,405 + MMP_RS03515 0.22 +0.2 659,405 + MMP_RS03515 0.22 +1.3 659,433 - MMP_RS03515 0.25 +0.6 659,440 - MMP_RS03515 0.26 -1.5 659,443 - MMP_RS03515 0.26 +1.0 659,444 + MMP_RS03515 0.26 +0.5 659,447 - MMP_RS03515 0.27 -0.2 659,465 - MMP_RS03515 0.29 +0.3 659,466 + MMP_RS03515 0.29 -0.1 659,470 - MMP_RS03515 0.29 -1.3 659,495 - MMP_RS03515 0.32 -0.8 659,660 - MMP_RS03515 0.51 +0.4 659,660 - MMP_RS03515 0.51 +0.2 659,660 - MMP_RS03515 0.51 +0.7 659,660 - MMP_RS03515 0.51 +1.2 659,660 - MMP_RS03515 0.51 +0.7 659,661 + MMP_RS03515 0.51 +0.1 659,695 - MMP_RS03515 0.55 +0.5 659,743 + MMP_RS03515 0.60 +0.9 659,751 - MMP_RS03515 0.61 +0.4 659,751 - MMP_RS03515 0.61 -0.1 659,778 - MMP_RS03515 0.64 -0.6 659,781 + MMP_RS03515 0.64 -0.5 659,897 + MMP_RS03515 0.77 -0.2 659,956 - MMP_RS03515 0.84 -1.1 659,959 + MMP_RS03515 0.84 -0.3 659,959 + MMP_RS03515 0.84 -0.0 660,015 - -0.3 660,027 + +0.3 660,058 - +0.2 660,098 + +0.1
Or see this region's nucleotide sequence