Experiment: H2 N-free with 10mM L-Aspartic Acid
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS07935 and MMP_RS07940 are separated by 21 nucleotides MMP_RS07940 and MMP_RS07945 are separated by 40 nucleotides MMP_RS07945 and MMP_RS07950 are separated by 38 nucleotides MMP_RS07950 and MMP_RS07955 are separated by 86 nucleotides
MMP_RS07935: MMP_RS07935 - 50S ribosomal protein L4, at 1,499,911 to 1,500,669
_RS07935
MMP_RS07940: MMP_RS07940 - 50S ribosomal protein L23, at 1,500,691 to 1,500,951
_RS07940
MMP_RS07945: MMP_RS07945 - 50S ribosomal protein L2, at 1,500,992 to 1,501,714
_RS07945
MMP_RS07950: MMP_RS07950 - 30S ribosomal protein S19, at 1,501,753 to 1,502,238
_RS07950
MMP_RS07955: MMP_RS07955 - FumA C-terminus/TtdB family hydratase beta subunit, at 1,502,325 to 1,502,897
_RS07955
Position (kb) 1500
1501
1502 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1502.379 kb on + strand at 1502.385 kb on - strand, within MMP_RS07955 at 1502.386 kb on + strand, within MMP_RS07955 at 1502.386 kb on + strand, within MMP_RS07955 at 1502.390 kb on - strand, within MMP_RS07955 at 1502.483 kb on + strand, within MMP_RS07955 at 1502.622 kb on + strand, within MMP_RS07955 at 1502.635 kb on + strand, within MMP_RS07955
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 10mM L-Aspartic Acid remove 1,502,379 + +0.2 1,502,385 - MMP_RS07955 0.10 -0.7 1,502,386 + MMP_RS07955 0.11 +0.4 1,502,386 + MMP_RS07955 0.11 -3.5 1,502,390 - MMP_RS07955 0.11 +0.9 1,502,483 + MMP_RS07955 0.28 +0.4 1,502,622 + MMP_RS07955 0.52 -0.1 1,502,635 + MMP_RS07955 0.54 -0.4
Or see this region's nucleotide sequence