Experiment: H2 N-free with 10mM L-Aspartic Acid
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS07780 and MMP_RS07785 are separated by 94 nucleotides MMP_RS07785 and MMP_RS07790 are separated by 183 nucleotides MMP_RS07790 and MMP_RS07795 are separated by 18 nucleotides
MMP_RS07780: MMP_RS07780 - prephenate dehydrogenase, at 1,473,118 to 1,474,458
_RS07780
MMP_RS07785: MMP_RS07785 - TCP-1/cpn60 chaperonin family protein, at 1,474,553 to 1,476,184
_RS07785
MMP_RS07790: MMP_RS07790 - segregation/condensation protein A, at 1,476,368 to 1,477,036
_RS07790
MMP_RS07795: MMP_RS07795 - site-2 protease family protein, at 1,477,055 to 1,477,657
_RS07795
Position (kb)
1474
1475
1476
1477 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1473.653 kb on - strand at 1473.772 kb on + strand at 1473.774 kb on - strand at 1473.806 kb on - strand at 1473.807 kb on + strand at 1473.807 kb on + strand at 1473.880 kb on + strand at 1473.976 kb on + strand at 1474.085 kb on + strand at 1474.223 kb on + strand at 1474.283 kb on - strand at 1474.317 kb on - strand at 1474.463 kb on + strand at 1474.464 kb on - strand at 1474.466 kb on - strand at 1474.486 kb on + strand at 1475.057 kb on - strand at 1475.991 kb on + strand at 1476.162 kb on + strand at 1476.384 kb on + strand at 1476.447 kb on + strand, within MMP_RS07790 at 1476.470 kb on + strand, within MMP_RS07790 at 1476.540 kb on + strand, within MMP_RS07790 at 1476.551 kb on - strand, within MMP_RS07790 at 1476.551 kb on - strand, within MMP_RS07790 at 1476.554 kb on + strand, within MMP_RS07790 at 1476.597 kb on - strand, within MMP_RS07790 at 1476.597 kb on - strand, within MMP_RS07790 at 1476.598 kb on + strand, within MMP_RS07790 at 1476.765 kb on - strand, within MMP_RS07790 at 1476.765 kb on - strand, within MMP_RS07790 at 1476.766 kb on + strand, within MMP_RS07790 at 1476.927 kb on + strand, within MMP_RS07790 at 1476.950 kb on - strand, within MMP_RS07790 at 1476.950 kb on - strand, within MMP_RS07790 at 1477.148 kb on - strand, within MMP_RS07795 at 1477.180 kb on - strand, within MMP_RS07795 at 1477.184 kb on - strand, within MMP_RS07795
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 10mM L-Aspartic Acid remove 1,473,653 - -3.3 1,473,772 + -0.4 1,473,774 - -1.5 1,473,806 - -2.6 1,473,807 + -3.3 1,473,807 + -2.8 1,473,880 + +0.2 1,473,976 + -2.9 1,474,085 + -3.9 1,474,223 + -0.9 1,474,283 - -2.2 1,474,317 - -3.7 1,474,463 + +0.2 1,474,464 - +0.8 1,474,466 - -0.3 1,474,486 + +0.9 1,475,057 - -1.9 1,475,991 + -4.3 1,476,162 + -1.6 1,476,384 + -0.1 1,476,447 + MMP_RS07790 0.12 -0.6 1,476,470 + MMP_RS07790 0.15 -1.3 1,476,540 + MMP_RS07790 0.26 -0.5 1,476,551 - MMP_RS07790 0.27 +0.1 1,476,551 - MMP_RS07790 0.27 +0.2 1,476,554 + MMP_RS07790 0.28 +0.1 1,476,597 - MMP_RS07790 0.34 +0.0 1,476,597 - MMP_RS07790 0.34 +0.3 1,476,598 + MMP_RS07790 0.34 -0.2 1,476,765 - MMP_RS07790 0.59 -0.2 1,476,765 - MMP_RS07790 0.59 +0.6 1,476,766 + MMP_RS07790 0.59 +0.4 1,476,927 + MMP_RS07790 0.84 -0.8 1,476,950 - MMP_RS07790 0.87 +0.1 1,476,950 - MMP_RS07790 0.87 +0.2 1,477,148 - MMP_RS07795 0.15 +0.9 1,477,180 - MMP_RS07795 0.21 +0.1 1,477,184 - MMP_RS07795 0.21 +0.6
Or see this region's nucleotide sequence