Experiment: H2 N-free with 10mM L-Aspartic Acid
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS07305 and MMP_RS07310 are separated by 14 nucleotides MMP_RS07310 and MMP_RS07320 are separated by 227 nucleotides MMP_RS07320 and MMP_RS07325 are separated by 39 nucleotides
MMP_RS07305: MMP_RS07305 - 50S ribosomal protein L30, at 1,392,104 to 1,392,568
_RS07305
MMP_RS07310: MMP_RS07310 - 50S ribosomal protein L15, at 1,392,583 to 1,393,014
_RS07310
MMP_RS07320: MMP_RS07320 - preprotein translocase subunit SecY, at 1,393,242 to 1,394,570
_RS07320
MMP_RS07325: MMP_RS07325 - glycosyl transferase, at 1,394,610 to 1,395,509
_RS07325
Position (kb)
1393
1394
1395 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 1392.436 kb on + strand at 1393.095 kb on - strand at 1393.175 kb on + strand at 1393.271 kb on - strand at 1393.363 kb on + strand at 1393.915 kb on - strand at 1394.152 kb on + strand at 1394.234 kb on + strand at 1394.502 kb on - strand at 1394.582 kb on - strand at 1394.644 kb on + strand at 1394.692 kb on + strand at 1394.702 kb on + strand at 1394.799 kb on - strand at 1394.985 kb on - strand at 1394.986 kb on + strand at 1395.039 kb on + strand at 1395.421 kb on - strand at 1395.490 kb on + strand at 1395.523 kb on + strand at 1395.523 kb on + strand at 1395.523 kb on + strand at 1395.528 kb on + strand at 1395.554 kb on - strand at 1395.555 kb on + strand at 1395.558 kb on - strand at 1395.558 kb on - strand at 1395.559 kb on + strand at 1395.560 kb on - strand at 1395.561 kb on + strand at 1395.561 kb on + strand at 1395.561 kb on + strand at 1395.561 kb on + strand at 1395.563 kb on + strand at 1395.564 kb on - strand at 1395.564 kb on - strand at 1395.564 kb on - strand at 1395.565 kb on + strand at 1395.565 kb on + strand at 1395.565 kb on + strand at 1395.565 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 10mM L-Aspartic Acid remove 1,392,436 + -3.0 1,393,095 - -0.9 1,393,175 + -3.6 1,393,271 - -1.2 1,393,363 + -4.2 1,393,915 - -1.9 1,394,152 + -2.0 1,394,234 + -2.2 1,394,502 - -0.6 1,394,582 - -1.5 1,394,644 + -1.7 1,394,692 + -0.6 1,394,702 + -1.4 1,394,799 - -1.5 1,394,985 - -2.9 1,394,986 + -1.5 1,395,039 + -0.3 1,395,421 - -0.7 1,395,490 + -0.0 1,395,523 + -1.9 1,395,523 + -5.0 1,395,523 + -1.6 1,395,528 + +0.5 1,395,554 - +0.8 1,395,555 + +0.6 1,395,558 - +0.8 1,395,558 - -0.1 1,395,559 + +0.5 1,395,560 - +0.5 1,395,561 + +1.0 1,395,561 + +0.3 1,395,561 + +0.3 1,395,561 + +0.0 1,395,563 + +1.4 1,395,564 - -1.7 1,395,564 - -0.2 1,395,564 - -1.0 1,395,565 + +0.8 1,395,565 + -0.1 1,395,565 + +1.0 1,395,565 + +0.6
Or see this region's nucleotide sequence