Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07295

Experiment: H2 N-free with 10mM L-Aspartic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMMP_RS07280 and MMP_RS07285 are separated by 9 nucleotidesMMP_RS07285 and MMP_RS07290 are separated by 26 nucleotidesMMP_RS07290 and MMP_RS07295 are separated by 23 nucleotidesMMP_RS07295 and MMP_RS07300 are separated by 10 nucleotidesMMP_RS07300 and MMP_RS07305 are separated by 31 nucleotides MMP_RS07280: MMP_RS07280 - 50S ribosomal protein L6, at 1,389,338 to 1,389,886 _RS07280 MMP_RS07285: MMP_RS07285 - 50S ribosomal protein L32e, at 1,389,896 to 1,390,303 _RS07285 MMP_RS07290: MMP_RS07290 - 50S ribosomal protein L19e, at 1,390,330 to 1,390,779 _RS07290 MMP_RS07295: MMP_RS07295 - 50S ribosomal protein L18, at 1,390,803 to 1,391,384 _RS07295 MMP_RS07300: MMP_RS07300 - 30S ribosomal protein S5, at 1,391,395 to 1,392,072 _RS07300 MMP_RS07305: MMP_RS07305 - 50S ribosomal protein L30, at 1,392,104 to 1,392,568 _RS07305 Position (kb) 1390 1391 1392Strain fitness (log2 ratio) -3 -2 -1 0 1at 1390.778 kb on + strandat 1391.393 kb on + strandat 1392.205 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction H2 N-free with 10mM L-Aspartic Acid
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1,390,778 + -3.2
1,391,393 + -3.0
1,392,205 - -1.6

Or see this region's nucleotide sequence