Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07280

Experiment: H2 N-free with 10mM L-Aspartic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMMP_RS07265 and MMP_RS07270 are separated by 9 nucleotidesMMP_RS07270 and MMP_RS07275 are separated by 18 nucleotidesMMP_RS07275 and MMP_RS07280 are separated by 21 nucleotidesMMP_RS07280 and MMP_RS07285 are separated by 9 nucleotidesMMP_RS07285 and MMP_RS07290 are separated by 26 nucleotidesMMP_RS07290 and MMP_RS07295 are separated by 23 nucleotides MMP_RS07265: MMP_RS07265 - 50S ribosomal protein L5, at 1,388,189 to 1,388,734 _RS07265 MMP_RS07270: MMP_RS07270 - 30S ribosomal protein S14, at 1,388,744 to 1,388,905 _RS07270 MMP_RS07275: MMP_RS07275 - 30S ribosomal protein S8, at 1,388,924 to 1,389,316 _RS07275 MMP_RS07280: MMP_RS07280 - 50S ribosomal protein L6, at 1,389,338 to 1,389,886 _RS07280 MMP_RS07285: MMP_RS07285 - 50S ribosomal protein L32e, at 1,389,896 to 1,390,303 _RS07285 MMP_RS07290: MMP_RS07290 - 50S ribosomal protein L19e, at 1,390,330 to 1,390,779 _RS07290 MMP_RS07295: MMP_RS07295 - 50S ribosomal protein L18, at 1,390,803 to 1,391,384 _RS07295 Position (kb) 1389 1390Strain fitness (log2 ratio) -3 -2 -1 0 1at 1390.778 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction H2 N-free with 10mM L-Aspartic Acid
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1,390,778 + -3.2

Or see this region's nucleotide sequence