Experiment: H2 N-free with 10mM L-Aspartic Acid
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS07245 and MMP_RS07250 are separated by 20 nucleotides MMP_RS07250 and MMP_RS07255 are separated by 19 nucleotides MMP_RS07255 and MMP_RS07260 are separated by 11 nucleotides MMP_RS07260 and MMP_RS07265 are separated by 28 nucleotides MMP_RS07265 and MMP_RS07270 are separated by 9 nucleotides MMP_RS07270 and MMP_RS07275 are separated by 18 nucleotides
MMP_RS07245: MMP_RS07245 - 30S ribosomal protein S17, at 1,386,287 to 1,386,616
_RS07245
MMP_RS07250: MMP_RS07250 - 50S ribosomal protein L14, at 1,386,637 to 1,387,035
_RS07250
MMP_RS07255: MMP_RS07255 - 50S ribosomal protein L24, at 1,387,055 to 1,387,414
_RS07255
MMP_RS07260: MMP_RS07260 - 30S ribosomal protein S4e, at 1,387,426 to 1,388,160
_RS07260
MMP_RS07265: MMP_RS07265 - 50S ribosomal protein L5, at 1,388,189 to 1,388,734
_RS07265
MMP_RS07270: MMP_RS07270 - 30S ribosomal protein S14, at 1,388,744 to 1,388,905
_RS07270
MMP_RS07275: MMP_RS07275 - 30S ribosomal protein S8, at 1,388,924 to 1,389,316
_RS07275
Position (kb) 1387
1388
1389 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1386.453 kb on - strand at 1386.637 kb on + strand at 1386.750 kb on + strand at 1386.900 kb on + strand at 1388.293 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 10mM L-Aspartic Acid remove 1,386,453 - -3.0 1,386,637 + -2.6 1,386,750 + -1.2 1,386,900 + -3.3 1,388,293 + -0.0
Or see this region's nucleotide sequence