Experiment: H2 N-free with 10mM L-Aspartic Acid
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS07010 and MMP_RS07015 are separated by 253 nucleotides MMP_RS07015 and MMP_RS07020 are separated by 81 nucleotides
MMP_RS07010: MMP_RS07010 - homocysteine biosynthesis protein, at 1,337,240 to 1,338,781
_RS07010
MMP_RS07015: MMP_RS07015 - DNA-directed RNA polymerase subunit H, at 1,339,035 to 1,339,271
_RS07015
MMP_RS07020: MMP_RS07020 - DNA-directed RNA polymerase subunit B'', at 1,339,353 to 1,340,852
_RS07020
Position (kb)
1339
1340 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1338.159 kb on - strand at 1338.159 kb on - strand at 1338.201 kb on + strand at 1338.259 kb on + strand at 1338.259 kb on + strand at 1338.259 kb on + strand at 1338.300 kb on - strand at 1338.398 kb on + strand at 1338.402 kb on - strand at 1338.804 kb on + strand at 1338.822 kb on + strand at 1338.827 kb on + strand at 1338.857 kb on - strand at 1338.858 kb on + strand at 1338.859 kb on - strand at 1338.862 kb on - strand at 1338.864 kb on - strand at 1338.864 kb on - strand at 1338.864 kb on - strand at 1338.864 kb on - strand at 1338.865 kb on + strand at 1338.866 kb on - strand at 1338.867 kb on + strand at 1338.867 kb on + strand at 1338.873 kb on - strand at 1338.878 kb on - strand at 1338.879 kb on + strand at 1338.880 kb on - strand at 1338.880 kb on - strand at 1338.882 kb on - strand at 1338.883 kb on + strand at 1338.883 kb on + strand at 1338.889 kb on + strand at 1338.926 kb on + strand at 1338.942 kb on - strand at 1338.945 kb on - strand at 1338.948 kb on + strand at 1339.284 kb on + strand at 1339.317 kb on - strand at 1339.943 kb on + strand at 1340.021 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 10mM L-Aspartic Acid remove 1,338,159 - -2.3 1,338,159 - -2.7 1,338,201 + -3.0 1,338,259 + -1.0 1,338,259 + -4.4 1,338,259 + -1.1 1,338,300 - -1.2 1,338,398 + -4.0 1,338,402 - -2.8 1,338,804 + -3.6 1,338,822 + -2.6 1,338,827 + -3.5 1,338,857 - +0.3 1,338,858 + -1.7 1,338,859 - -1.0 1,338,862 - +0.3 1,338,864 - -0.5 1,338,864 - -0.7 1,338,864 - -1.2 1,338,864 - +1.8 1,338,865 + -3.7 1,338,866 - -2.3 1,338,867 + -2.8 1,338,867 + -1.9 1,338,873 - +0.6 1,338,878 - +0.0 1,338,879 + -1.4 1,338,880 - +0.5 1,338,880 - +0.1 1,338,882 - +0.2 1,338,883 + +0.1 1,338,883 + +0.6 1,338,889 + +0.4 1,338,926 + +1.9 1,338,942 - -1.9 1,338,945 - +0.7 1,338,948 + -0.7 1,339,284 + -1.5 1,339,317 - -1.5 1,339,943 + -2.4 1,340,021 + +0.6
Or see this region's nucleotide sequence