Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05755

Experiment: H2 N-free with 10mM L-Aspartic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMMP_RS05750 and MMP_RS05755 are separated by 56 nucleotidesMMP_RS05755 and MMP_RS05760 are separated by 13 nucleotides MMP_RS05750: MMP_RS05750 - transketolase family protein, at 1,103,223 to 1,104,161 _RS05750 MMP_RS05755: MMP_RS05755 - ribulose-phosphate 3-epimerase, at 1,104,218 to 1,104,877 _RS05755 MMP_RS05760: MMP_RS05760 - transketolase, at 1,104,891 to 1,105,718 _RS05760 Position (kb) 1104 1105Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1103.537 kb on - strandat 1103.676 kb on - strandat 1104.081 kb on - strandat 1104.162 kb on + strandat 1104.163 kb on - strandat 1104.597 kb on - strandat 1104.708 kb on + strandat 1104.746 kb on - strandat 1104.991 kb on + strandat 1105.093 kb on + strandat 1105.394 kb on - strandat 1105.854 kb on - strandat 1105.867 kb on + strandat 1105.869 kb on - strandat 1105.869 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction H2 N-free with 10mM L-Aspartic Acid
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1,103,537 - -2.1
1,103,676 - -1.9
1,104,081 - -4.2
1,104,162 + -0.1
1,104,163 - -0.6
1,104,597 - -2.7
1,104,708 + -2.0
1,104,746 - -1.5
1,104,991 + -0.6
1,105,093 + -3.3
1,105,394 - -2.8
1,105,854 - -0.8
1,105,867 + -1.4
1,105,869 - +0.9
1,105,869 - +0.0

Or see this region's nucleotide sequence