Experiment: H2 N-free with 10mM L-Aspartic Acid
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS05720 and MMP_RS05725 are separated by 13 nucleotides MMP_RS05725 and MMP_RS05730 are separated by 11 nucleotides MMP_RS05730 and MMP_RS05735 are separated by 28 nucleotides
MMP_RS05720: MMP_RS05720 - signal recognition particle subunit SRP19/SEC65 family protein, at 1,097,784 to 1,098,053
_RS05720
MMP_RS05725: MMP_RS05725 - magnesium/cobalt transporter CorA, at 1,098,067 to 1,099,017
_RS05725
MMP_RS05730: MMP_RS05730 - DUF373 family protein, at 1,099,029 to 1,100,138
_RS05730
MMP_RS05735: MMP_RS05735 - oligosaccharide repeat unit polymerase family protein, at 1,100,167 to 1,101,342
_RS05735
Position (kb)
1099
1100
1101 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 1098.106 kb on - strand at 1098.176 kb on - strand at 1098.195 kb on + strand at 1098.343 kb on - strand at 1098.441 kb on - strand at 1098.450 kb on - strand at 1098.490 kb on - strand at 1098.534 kb on - strand at 1098.589 kb on - strand at 1098.594 kb on - strand at 1098.616 kb on - strand at 1098.803 kb on - strand at 1098.806 kb on - strand at 1098.811 kb on + strand at 1098.939 kb on - strand at 1098.955 kb on + strand at 1098.958 kb on - strand at 1098.959 kb on + strand at 1099.071 kb on - strand at 1099.072 kb on + strand at 1099.087 kb on + strand at 1099.092 kb on - strand at 1099.101 kb on - strand at 1099.101 kb on - strand at 1099.101 kb on - strand at 1099.105 kb on - strand at 1099.106 kb on + strand at 1099.106 kb on + strand at 1099.106 kb on + strand at 1099.287 kb on - strand at 1099.365 kb on - strand at 1099.405 kb on + strand at 1099.663 kb on - strand at 1099.781 kb on + strand at 1099.810 kb on + strand at 1099.863 kb on - strand at 1099.863 kb on - strand at 1099.863 kb on - strand at 1099.864 kb on + strand at 1099.864 kb on + strand at 1099.864 kb on + strand at 1100.030 kb on - strand at 1100.295 kb on + strand at 1100.310 kb on - strand at 1100.311 kb on + strand at 1100.332 kb on - strand at 1100.894 kb on + strand at 1100.960 kb on - strand at 1100.980 kb on - strand at 1101.022 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 10mM L-Aspartic Acid remove 1,098,106 - -1.9 1,098,176 - -2.6 1,098,195 + -4.5 1,098,343 - -0.6 1,098,441 - -3.8 1,098,450 - -3.8 1,098,490 - -2.1 1,098,534 - -0.6 1,098,589 - -2.6 1,098,594 - -3.1 1,098,616 - -1.3 1,098,803 - -2.5 1,098,806 - -4.5 1,098,811 + -0.6 1,098,939 - -2.8 1,098,955 + -5.2 1,098,958 - -1.6 1,098,959 + -2.5 1,099,071 - -2.6 1,099,072 + -5.0 1,099,087 + -5.5 1,099,092 - -2.1 1,099,101 - -2.1 1,099,101 - -3.7 1,099,101 - -4.9 1,099,105 - -0.7 1,099,106 + -1.7 1,099,106 + -2.8 1,099,106 + -1.8 1,099,287 - -3.0 1,099,365 - -4.3 1,099,405 + -4.8 1,099,663 - -2.5 1,099,781 + -1.7 1,099,810 + -0.6 1,099,863 - -2.5 1,099,863 - -4.5 1,099,863 - -3.3 1,099,864 + -3.3 1,099,864 + -1.1 1,099,864 + -2.3 1,100,030 - +0.3 1,100,295 + -4.9 1,100,310 - -3.3 1,100,311 + -2.5 1,100,332 - -4.6 1,100,894 + +0.1 1,100,960 - -0.2 1,100,980 - -2.2 1,101,022 - -3.5
Or see this region's nucleotide sequence