Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05210

Experiment: H2 N-free with 10mM L-Aspartic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMMP_RS05205 and MMP_RS05210 overlap by 8 nucleotidesMMP_RS05210 and MMP_RS05215 overlap by 1 nucleotides MMP_RS05205: MMP_RS05205 - anthranilate synthase component I, at 989,744 to 991,063 _RS05205 MMP_RS05210: MMP_RS05210 - anthranilate phosphoribosyltransferase, at 991,056 to 992,021 _RS05210 MMP_RS05215: MMP_RS05215 - indole-3-glycerol phosphate synthase TrpC, at 992,021 to 992,710 _RS05215 Position (kb) 991 992 993Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 990.062 kb on - strandat 990.129 kb on + strandat 990.296 kb on + strandat 990.514 kb on + strandat 990.539 kb on - strandat 990.709 kb on + strandat 990.709 kb on + strandat 990.788 kb on + strandat 990.973 kb on - strandat 991.085 kb on - strandat 991.160 kb on - strandat 991.393 kb on + strandat 991.523 kb on - strandat 991.634 kb on - strandat 992.540 kb on + strandat 992.541 kb on - strandat 992.573 kb on - strandat 992.740 kb on + strandat 992.740 kb on + strandat 992.813 kb on - strandat 992.813 kb on - strandat 992.813 kb on - strandat 992.813 kb on - strandat 992.814 kb on + strandat 992.814 kb on + strandat 992.871 kb on - strandat 992.951 kb on + strandat 992.965 kb on - strandat 992.986 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction H2 N-free with 10mM L-Aspartic Acid
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990,062 - -1.4
990,129 + -2.0
990,296 + -2.6
990,514 + -1.4
990,539 - -3.7
990,709 + -4.9
990,709 + -1.2
990,788 + -3.2
990,973 - -2.1
991,085 - -3.3
991,160 - -2.2
991,393 + -3.2
991,523 - -2.6
991,634 - +0.4
992,540 + -3.0
992,541 - -1.2
992,573 - -0.3
992,740 + -2.6
992,740 + -5.1
992,813 - -1.5
992,813 - -1.4
992,813 - -0.6
992,813 - -1.0
992,814 + -4.2
992,814 + -1.7
992,871 - -2.9
992,951 + +0.8
992,965 - -1.2
992,986 + -2.5

Or see this region's nucleotide sequence