Experiment: H2 N-free with 10mM L-Aspartic Acid
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS04930 and MMP_RS04935 are separated by 92 nucleotides MMP_RS04935 and MMP_RS04940 are separated by 142 nucleotides
MMP_RS04930: MMP_RS04930 - adenosylcobinamide-phosphate synthase CbiB, at 939,228 to 940,148
_RS04930
MMP_RS04935: MMP_RS04935 - translation initiation factor IF-5A, at 940,241 to 940,636
_RS04935
MMP_RS04940: MMP_RS04940 - precorrin-3B C(17)-methyltransferase, at 940,779 to 941,531
_RS04940
Position (kb)
940
941 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 939.311 kb on + strand at 939.406 kb on - strand at 939.413 kb on + strand at 939.461 kb on + strand at 939.579 kb on + strand at 939.692 kb on - strand at 939.721 kb on + strand at 939.814 kb on + strand at 939.846 kb on + strand at 939.892 kb on - strand at 940.128 kb on - strand at 940.129 kb on + strand at 940.131 kb on + strand at 940.135 kb on - strand at 940.146 kb on - strand at 940.147 kb on + strand at 940.185 kb on + strand at 940.214 kb on + strand at 940.214 kb on + strand at 940.229 kb on - strand at 940.229 kb on - strand at 940.296 kb on + strand at 940.587 kb on - strand at 940.600 kb on - strand at 940.671 kb on - strand at 940.676 kb on + strand at 940.695 kb on + strand at 940.696 kb on - strand at 940.697 kb on + strand at 940.698 kb on - strand at 940.698 kb on - strand at 940.698 kb on - strand at 940.698 kb on - strand at 940.699 kb on + strand at 940.704 kb on + strand at 940.704 kb on + strand at 940.737 kb on + strand at 940.737 kb on + strand at 940.742 kb on - strand at 940.746 kb on + strand at 940.747 kb on - strand at 940.747 kb on - strand at 940.747 kb on - strand at 940.747 kb on - strand at 940.747 kb on - strand at 940.748 kb on + strand at 940.748 kb on + strand at 940.748 kb on + strand at 940.748 kb on + strand at 940.749 kb on - strand at 940.749 kb on - strand at 940.749 kb on - strand at 940.749 kb on - strand at 940.749 kb on - strand at 940.749 kb on - strand at 940.750 kb on + strand at 940.750 kb on + strand at 940.751 kb on - strand at 940.751 kb on - strand at 940.751 kb on - strand at 940.752 kb on + strand at 940.752 kb on + strand at 940.752 kb on + strand at 940.754 kb on + strand at 940.762 kb on + strand at 940.769 kb on - strand at 940.787 kb on + strand at 940.796 kb on - strand at 940.796 kb on - strand at 940.797 kb on + strand at 940.797 kb on + strand at 940.797 kb on + strand at 940.797 kb on + strand at 940.798 kb on - strand at 940.798 kb on - strand at 940.820 kb on - strand at 940.839 kb on + strand at 940.865 kb on - strand at 940.886 kb on - strand at 940.897 kb on + strand at 940.901 kb on - strand at 941.003 kb on + strand at 941.188 kb on + strand at 941.188 kb on + strand at 941.188 kb on + strand at 941.223 kb on - strand at 941.290 kb on - strand at 941.290 kb on - strand at 941.290 kb on - strand at 941.291 kb on + strand at 941.292 kb on - strand at 941.292 kb on - strand at 941.292 kb on - strand at 941.293 kb on + strand at 941.293 kb on + strand at 941.293 kb on + strand at 941.293 kb on + strand at 941.293 kb on + strand at 941.293 kb on + strand at 941.346 kb on - strand at 941.376 kb on + strand at 941.419 kb on - strand at 941.420 kb on + strand at 941.448 kb on - strand at 941.457 kb on + strand at 941.524 kb on - strand at 941.524 kb on - strand at 941.524 kb on - strand at 941.554 kb on - strand at 941.580 kb on - strand at 941.584 kb on - strand at 941.590 kb on - strand at 941.591 kb on + strand at 941.591 kb on + strand at 941.591 kb on + strand at 941.592 kb on - strand at 941.593 kb on + strand at 941.598 kb on - strand at 941.598 kb on - strand at 941.599 kb on + strand at 941.606 kb on + strand at 941.618 kb on - strand at 941.619 kb on + strand at 941.619 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 10mM L-Aspartic Acid remove 939,311 + -0.9 939,406 - -3.7 939,413 + -1.8 939,461 + -2.3 939,579 + -4.4 939,692 - -3.1 939,721 + -2.7 939,814 + -4.3 939,846 + -4.1 939,892 - -5.3 940,128 - -0.5 940,129 + -1.5 940,131 + -1.1 940,135 - -1.9 940,146 - +0.8 940,147 + +0.3 940,185 + +0.7 940,214 + -0.6 940,214 + -0.3 940,229 - -0.6 940,229 - +0.7 940,296 + -5.2 940,587 - -2.5 940,600 - -3.3 940,671 - -3.0 940,676 + -2.7 940,695 + -1.4 940,696 - -1.0 940,697 + -2.6 940,698 - -2.9 940,698 - -1.1 940,698 - -3.3 940,698 - -2.2 940,699 + -1.4 940,704 + +0.8 940,704 + -0.5 940,737 + -2.2 940,737 + -0.8 940,742 - -2.6 940,746 + -1.4 940,747 - -1.3 940,747 - -2.3 940,747 - -0.2 940,747 - -1.2 940,747 - -2.2 940,748 + -0.7 940,748 + -1.3 940,748 + -0.7 940,748 + -1.0 940,749 - -0.0 940,749 - +0.3 940,749 - +0.3 940,749 - +0.7 940,749 - -0.1 940,749 - -0.8 940,750 + -1.1 940,750 + +0.1 940,751 - -0.1 940,751 - -0.1 940,751 - -0.1 940,752 + +0.3 940,752 + +0.5 940,752 + -2.1 940,754 + -0.1 940,762 + -0.6 940,769 - +0.1 940,787 + +0.1 940,796 - +0.6 940,796 - -0.2 940,797 + +0.0 940,797 + -1.1 940,797 + +0.1 940,797 + -0.1 940,798 - -3.0 940,798 - -2.4 940,820 - -4.3 940,839 + -3.7 940,865 - -3.5 940,886 - -4.3 940,897 + -2.3 940,901 - -4.8 941,003 + -4.4 941,188 + -1.8 941,188 + -2.5 941,188 + -4.3 941,223 - -2.6 941,290 - -3.2 941,290 - -5.3 941,290 - -2.1 941,291 + -1.2 941,292 - -3.1 941,292 - -2.3 941,292 - -2.7 941,293 + -2.6 941,293 + -1.8 941,293 + -2.8 941,293 + -2.5 941,293 + -3.0 941,293 + -2.1 941,346 - -2.3 941,376 + -3.5 941,419 - -1.4 941,420 + -2.4 941,448 - -2.7 941,457 + -2.8 941,524 - -3.0 941,524 - -2.3 941,524 - -3.2 941,554 - -2.5 941,580 - -3.8 941,584 - -2.9 941,590 - -2.1 941,591 + -3.3 941,591 + -4.9 941,591 + -4.4 941,592 - -2.7 941,593 + -3.2 941,598 - +1.3 941,598 - +0.3 941,599 + +0.0 941,606 + -0.6 941,618 - +0.2 941,619 + -0.0 941,619 + -0.2
Or see this region's nucleotide sequence