Strain Fitness in Methanococcus maripaludis S2 around MMP_RS04760

Experiment: H2 N-free with 10mM L-Aspartic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMMP_RS04750 and MMP_RS04755 overlap by 4 nucleotidesMMP_RS04755 and MMP_RS04760 are separated by 63 nucleotidesMMP_RS04760 and MMP_RS04765 are separated by 45 nucleotides MMP_RS04750: MMP_RS04750 - TIGR00454 family protein, at 904,980 to 905,588 _RS04750 MMP_RS04755: MMP_RS04755 - PRC-barrel domain-containing protein, at 905,585 to 905,833 _RS04755 MMP_RS04760: MMP_RS04760 - diaminopimelate epimerase, at 905,897 to 906,730 _RS04760 MMP_RS04765: MMP_RS04765 - asparagine synthase (glutamine-hydrolyzing), at 906,776 to 908,317 _RS04765 Position (kb) 905 906 907Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1 2at 904.926 kb on - strandat 904.945 kb on + strandat 904.946 kb on - strandat 904.948 kb on - strandat 904.948 kb on - strandat 904.948 kb on - strandat 904.948 kb on - strandat 904.949 kb on + strandat 904.959 kb on + strandat 905.116 kb on - strandat 905.117 kb on + strandat 905.119 kb on + strandat 905.180 kb on + strandat 905.190 kb on - strandat 905.204 kb on + strandat 905.209 kb on - strandat 905.209 kb on - strandat 905.210 kb on + strandat 905.232 kb on - strandat 905.233 kb on + strandat 905.246 kb on + strandat 905.327 kb on - strandat 905.333 kb on + strandat 905.410 kb on + strandat 905.442 kb on - strandat 905.447 kb on + strandat 905.463 kb on + strandat 905.464 kb on - strandat 905.506 kb on - strandat 905.511 kb on + strandat 905.520 kb on + strandat 905.535 kb on + strandat 905.570 kb on - strandat 905.615 kb on + strandat 905.623 kb on + strandat 905.623 kb on + strandat 905.642 kb on + strandat 905.701 kb on + strandat 905.729 kb on + strandat 905.729 kb on + strandat 905.751 kb on + strandat 905.751 kb on + strandat 905.786 kb on + strandat 905.800 kb on - strandat 905.831 kb on - strandat 905.874 kb on + strandat 905.882 kb on - strandat 905.882 kb on - strandat 905.882 kb on - strandat 905.882 kb on - strandat 905.882 kb on - strandat 905.882 kb on - strandat 905.882 kb on - strandat 905.882 kb on - strandat 905.883 kb on + strandat 905.883 kb on + strandat 905.883 kb on + strandat 905.883 kb on + strandat 905.883 kb on + strandat 905.883 kb on + strandat 905.884 kb on - strandat 905.884 kb on - strandat 905.885 kb on + strandat 905.923 kb on + strandat 905.933 kb on - strandat 905.935 kb on - strandat 905.939 kb on - strandat 905.939 kb on - strandat 905.940 kb on + strandat 905.944 kb on + strandat 906.199 kb on + strandat 906.348 kb on + strandat 906.387 kb on - strandat 906.392 kb on - strandat 906.392 kb on - strandat 906.392 kb on - strandat 906.392 kb on - strandat 906.392 kb on - strandat 906.393 kb on + strandat 906.405 kb on - strandat 906.430 kb on + strandat 906.680 kb on - strandat 906.680 kb on - strandat 906.681 kb on + strandat 906.742 kb on + strandat 906.758 kb on - strandat 906.798 kb on + strandat 906.820 kb on - strandat 906.821 kb on + strandat 906.861 kb on - strandat 906.862 kb on + strandat 906.922 kb on + strandat 907.090 kb on - strandat 907.221 kb on + strandat 907.322 kb on - strandat 907.330 kb on + strandat 907.404 kb on - strandat 907.506 kb on - strandat 907.507 kb on + strandat 907.507 kb on + strandat 907.545 kb on + strandat 907.587 kb on + strandat 907.675 kb on - strandat 907.676 kb on + strandat 907.706 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction H2 N-free with 10mM L-Aspartic Acid
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904,926 - -0.0
904,945 + -0.4
904,946 - -3.0
904,948 - -1.6
904,948 - -3.6
904,948 - -4.3
904,948 - -1.2
904,949 + +2.1
904,959 + -3.0
905,116 - -4.5
905,117 + -1.2
905,119 + -1.9
905,180 + -4.3
905,190 - -3.3
905,204 + -3.4
905,209 - -2.4
905,209 - -3.7
905,210 + -1.8
905,232 - -2.9
905,233 + -3.9
905,246 + -5.0
905,327 - -0.1
905,333 + -3.2
905,410 + -2.1
905,442 - -3.3
905,447 + -2.1
905,463 + -4.2
905,464 - -4.6
905,506 - -3.3
905,511 + -3.3
905,520 + -2.5
905,535 + -3.1
905,570 - -3.2
905,615 + -1.5
905,623 + -2.6
905,623 + -1.3
905,642 + -2.9
905,701 + -1.6
905,729 + -3.9
905,729 + -3.7
905,751 + -4.8
905,751 + -4.6
905,786 + -4.5
905,800 - -2.7
905,831 - -1.7
905,874 + -1.4
905,882 - -2.9
905,882 - -2.2
905,882 - -3.1
905,882 - -2.3
905,882 - -3.3
905,882 - -4.8
905,882 - -1.8
905,882 - -3.5
905,883 + -2.4
905,883 + -2.1
905,883 + -1.4
905,883 + -1.5
905,883 + -1.2
905,883 + -0.8
905,884 - -3.0
905,884 - -2.4
905,885 + -1.9
905,923 + -2.7
905,933 - -4.4
905,935 - -4.1
905,939 - -1.7
905,939 - -1.5
905,940 + -5.8
905,944 + -3.6
906,199 + -4.6
906,348 + -1.3
906,387 - -3.1
906,392 - -2.1
906,392 - -5.2
906,392 - -1.5
906,392 - -2.5
906,392 - -3.9
906,393 + -1.7
906,405 - -3.5
906,430 + -4.1
906,680 - -3.5
906,680 - -2.0
906,681 + -2.8
906,742 + +0.4
906,758 - +0.7
906,798 + -0.2
906,820 - -1.8
906,821 + -2.3
906,861 - -1.1
906,862 + -3.3
906,922 + -0.9
907,090 - -3.5
907,221 + +0.1
907,322 - -2.4
907,330 + -4.3
907,404 - -1.8
907,506 - -2.4
907,507 + -4.3
907,507 + -2.0
907,545 + -0.7
907,587 + -2.9
907,675 - +0.6
907,676 + -2.9
907,706 + -1.3

Or see this region's nucleotide sequence