Strain Fitness in Methanococcus maripaludis S2 around MMP_RS03705

Experiment: H2 N-free with 10mM L-Aspartic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMMP_RS03700 and MMP_RS03705 are separated by 204 nucleotidesMMP_RS03705 and MMP_RS03710 are separated by 157 nucleotidesMMP_RS03710 and MMP_RS03715 are separated by 216 nucleotides MMP_RS03700: MMP_RS03700 - sodium:proton antiporter, at 697,771 to 699,024 _RS03700 MMP_RS03705: MMP_RS03705 - (5-formylfuran-3-yl)methyl phosphate synthase, at 699,229 to 699,939 _RS03705 MMP_RS03710: MMP_RS03710 - tRNA-Arg, at 700,097 to 700,170 _RS03710 MMP_RS03715: MMP_RS03715 - class III signal peptide-containing protein, at 700,387 to 700,983 _RS03715 Position (kb) 699 700Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 698.235 kb on - strand, within MMP_RS03700at 698.256 kb on + strand, within MMP_RS03700at 698.256 kb on + strand, within MMP_RS03700at 698.257 kb on - strand, within MMP_RS03700at 698.363 kb on + strand, within MMP_RS03700at 698.363 kb on + strand, within MMP_RS03700at 698.551 kb on - strand, within MMP_RS03700at 698.616 kb on - strand, within MMP_RS03700at 698.617 kb on + strand, within MMP_RS03700at 698.617 kb on + strand, within MMP_RS03700at 698.617 kb on + strand, within MMP_RS03700at 698.654 kb on - strand, within MMP_RS03700at 698.658 kb on - strand, within MMP_RS03700at 698.676 kb on - strand, within MMP_RS03700at 698.676 kb on - strand, within MMP_RS03700at 698.677 kb on + strand, within MMP_RS03700at 698.690 kb on - strand, within MMP_RS03700at 698.690 kb on - strand, within MMP_RS03700at 698.691 kb on + strand, within MMP_RS03700at 698.691 kb on + strand, within MMP_RS03700at 698.691 kb on + strand, within MMP_RS03700at 698.691 kb on + strand, within MMP_RS03700at 698.692 kb on - strand, within MMP_RS03700at 698.693 kb on + strand, within MMP_RS03700at 698.693 kb on + strand, within MMP_RS03700at 698.694 kb on - strand, within MMP_RS03700at 698.768 kb on + strand, within MMP_RS03700at 698.903 kb on + strandat 698.913 kb on - strandat 698.945 kb on + strandat 698.945 kb on + strandat 698.965 kb on - strandat 698.999 kb on - strandat 699.038 kb on + strandat 699.041 kb on - strandat 699.047 kb on + strandat 699.048 kb on - strandat 699.048 kb on - strandat 699.049 kb on + strandat 699.075 kb on - strandat 699.106 kb on - strandat 699.106 kb on - strandat 699.113 kb on - strandat 699.134 kb on + strandat 699.171 kb on - strandat 699.176 kb on + strandat 699.176 kb on + strandat 699.182 kb on + strandat 699.186 kb on + strandat 699.186 kb on + strandat 699.197 kb on - strandat 699.298 kb on + strandat 699.350 kb on - strandat 699.462 kb on + strandat 699.462 kb on + strandat 699.795 kb on - strandat 699.819 kb on + strandat 699.827 kb on - strandat 699.827 kb on - strandat 699.827 kb on - strandat 699.864 kb on - strandat 699.955 kb on + strandat 699.968 kb on + strandat 699.977 kb on + strandat 700.050 kb on - strandat 700.051 kb on + strandat 700.051 kb on + strandat 700.177 kb on - strandat 700.290 kb on - strandat 700.290 kb on - strandat 700.298 kb on + strandat 700.298 kb on + strandat 700.307 kb on + strandat 700.310 kb on + strandat 700.317 kb on + strandat 700.351 kb on - strandat 700.354 kb on + strandat 700.358 kb on - strandat 700.358 kb on - strandat 700.359 kb on + strandat 700.359 kb on + strandat 700.362 kb on - strandat 700.362 kb on - strandat 700.363 kb on + strandat 700.363 kb on + strandat 700.364 kb on - strandat 700.364 kb on - strandat 700.364 kb on - strandat 700.364 kb on - strandat 700.364 kb on - strandat 700.365 kb on + strandat 700.365 kb on + strandat 700.365 kb on + strandat 700.428 kb on + strandat 700.456 kb on - strand, within MMP_RS03715at 700.648 kb on - strand, within MMP_RS03715at 700.648 kb on - strand, within MMP_RS03715at 700.648 kb on - strand, within MMP_RS03715at 700.649 kb on + strand, within MMP_RS03715at 700.649 kb on + strand, within MMP_RS03715at 700.649 kb on + strand, within MMP_RS03715at 700.649 kb on + strand, within MMP_RS03715at 700.653 kb on - strand, within MMP_RS03715at 700.654 kb on + strand, within MMP_RS03715at 700.654 kb on + strand, within MMP_RS03715at 700.656 kb on - strand, within MMP_RS03715at 700.674 kb on + strand, within MMP_RS03715at 700.698 kb on + strand, within MMP_RS03715at 700.698 kb on + strand, within MMP_RS03715at 700.698 kb on + strand, within MMP_RS03715at 700.811 kb on + strand, within MMP_RS03715at 700.838 kb on - strand, within MMP_RS03715at 700.934 kb on + strandat 700.938 kb on + strandat 700.938 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction H2 N-free with 10mM L-Aspartic Acid
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698,235 - MMP_RS03700 0.37 -1.8
698,256 + MMP_RS03700 0.39 -1.6
698,256 + MMP_RS03700 0.39 -3.0
698,257 - MMP_RS03700 0.39 -1.8
698,363 + MMP_RS03700 0.47 -1.2
698,363 + MMP_RS03700 0.47 -1.5
698,551 - MMP_RS03700 0.62 -3.6
698,616 - MMP_RS03700 0.67 -5.1
698,617 + MMP_RS03700 0.67 -2.9
698,617 + MMP_RS03700 0.67 -1.4
698,617 + MMP_RS03700 0.67 -1.6
698,654 - MMP_RS03700 0.70 -2.2
698,658 - MMP_RS03700 0.71 -3.1
698,676 - MMP_RS03700 0.72 -2.5
698,676 - MMP_RS03700 0.72 -2.7
698,677 + MMP_RS03700 0.72 -2.6
698,690 - MMP_RS03700 0.73 -3.5
698,690 - MMP_RS03700 0.73 -2.8
698,691 + MMP_RS03700 0.73 -3.4
698,691 + MMP_RS03700 0.73 -3.8
698,691 + MMP_RS03700 0.73 -0.8
698,691 + MMP_RS03700 0.73 -1.0
698,692 - MMP_RS03700 0.73 -5.0
698,693 + MMP_RS03700 0.74 -0.8
698,693 + MMP_RS03700 0.74 -2.5
698,694 - MMP_RS03700 0.74 -4.4
698,768 + MMP_RS03700 0.80 -2.3
698,903 + -2.4
698,913 - -3.5
698,945 + -2.1
698,945 + -0.2
698,965 - -4.4
698,999 - -4.3
699,038 + -3.7
699,041 - -3.7
699,047 + -6.3
699,048 - -2.0
699,048 - -2.4
699,049 + -1.6
699,075 - -2.5
699,106 - -0.4
699,106 - -1.2
699,113 - -1.4
699,134 + -0.6
699,171 - -3.5
699,176 + -2.8
699,176 + -0.6
699,182 + -2.2
699,186 + -3.5
699,186 + -3.7
699,197 - -3.1
699,298 + -1.0
699,350 - -1.5
699,462 + -3.4
699,462 + -4.2
699,795 - -1.2
699,819 + -5.0
699,827 - -0.7
699,827 - -2.0
699,827 - -2.1
699,864 - -2.1
699,955 + +0.8
699,968 + -0.3
699,977 + -0.3
700,050 - -1.5
700,051 + -2.4
700,051 + -1.1
700,177 - +0.3
700,290 - +0.4
700,290 - -0.3
700,298 + +0.1
700,298 + +0.5
700,307 + +0.7
700,310 + -0.8
700,317 + +0.6
700,351 - +0.4
700,354 + -0.7
700,358 - -0.7
700,358 - +1.1
700,359 + +0.6
700,359 + +0.4
700,362 - -0.1
700,362 - +0.4
700,363 + -0.1
700,363 + +0.5
700,364 - +1.0
700,364 - +0.2
700,364 - -0.7
700,364 - +0.4
700,364 - +0.2
700,365 + -0.1
700,365 + -0.3
700,365 + -0.2
700,428 + -1.2
700,456 - MMP_RS03715 0.12 +0.2
700,648 - MMP_RS03715 0.44 +0.5
700,648 - MMP_RS03715 0.44 +0.6
700,648 - MMP_RS03715 0.44 -0.1
700,649 + MMP_RS03715 0.44 -0.1
700,649 + MMP_RS03715 0.44 +0.1
700,649 + MMP_RS03715 0.44 +1.2
700,649 + MMP_RS03715 0.44 -0.5
700,653 - MMP_RS03715 0.45 -0.3
700,654 + MMP_RS03715 0.45 +0.0
700,654 + MMP_RS03715 0.45 -0.4
700,656 - MMP_RS03715 0.45 +0.8
700,674 + MMP_RS03715 0.48 -0.1
700,698 + MMP_RS03715 0.52 +0.0
700,698 + MMP_RS03715 0.52 -0.1
700,698 + MMP_RS03715 0.52 +0.6
700,811 + MMP_RS03715 0.71 +0.6
700,838 - MMP_RS03715 0.76 -0.7
700,934 + +0.0
700,938 + -0.1
700,938 + +0.3

Or see this region's nucleotide sequence