Experiment: H2 N-free with 10mM L-Aspartic Acid
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS03635 and MMP_RS03640 are separated by 134 nucleotides MMP_RS03640 and MMP_RS03645 are separated by 95 nucleotides MMP_RS03645 and MMP_RS03650 are separated by 262 nucleotides
MMP_RS03635: MMP_RS03635 - beta-CASP ribonuclease aCPSF1, at 682,145 to 684,052
_RS03635
MMP_RS03640: MMP_RS03640 - archaeal proteasome endopeptidase complex subunit beta, at 684,187 to 684,846
_RS03640
MMP_RS03645: MMP_RS03645 - proline--tRNA ligase, at 684,942 to 686,324
_RS03645
MMP_RS03650: MMP_RS03650 - leucine--tRNA ligase, at 686,587 to 689,454
_RS03650
Position (kb)
684
685
686
687 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 684.066 kb on + strand at 684.072 kb on + strand at 684.147 kb on - strand at 684.148 kb on + strand at 684.172 kb on - strand at 684.272 kb on + strand, within MMP_RS03640 at 684.293 kb on - strand, within MMP_RS03640 at 684.293 kb on - strand, within MMP_RS03640 at 684.552 kb on - strand, within MMP_RS03640 at 684.631 kb on - strand, within MMP_RS03640 at 684.631 kb on - strand, within MMP_RS03640 at 684.682 kb on - strand, within MMP_RS03640 at 684.686 kb on - strand, within MMP_RS03640 at 684.860 kb on + strand at 684.860 kb on + strand at 684.862 kb on - strand at 684.875 kb on + strand at 684.893 kb on + strand at 684.943 kb on - strand at 684.944 kb on + strand at 684.944 kb on + strand at 684.966 kb on + strand at 684.983 kb on + strand at 685.193 kb on + strand at 685.699 kb on - strand at 685.701 kb on - strand at 685.772 kb on + strand at 685.944 kb on - strand at 686.003 kb on + strand at 686.006 kb on + strand at 686.209 kb on - strand at 686.341 kb on + strand at 686.393 kb on + strand at 686.397 kb on - strand at 686.397 kb on - strand at 686.406 kb on - strand at 686.406 kb on - strand at 686.406 kb on - strand at 686.410 kb on - strand at 686.421 kb on - strand at 686.422 kb on + strand at 686.422 kb on + strand at 686.422 kb on + strand at 686.429 kb on - strand at 686.430 kb on + strand at 686.430 kb on + strand at 686.442 kb on - strand at 686.454 kb on + strand at 686.464 kb on + strand at 686.476 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 10mM L-Aspartic Acid remove 684,066 + -3.8 684,072 + -4.0 684,147 - -1.4 684,148 + -2.3 684,172 - -0.9 684,272 + MMP_RS03640 0.13 -4.9 684,293 - MMP_RS03640 0.16 -1.6 684,293 - MMP_RS03640 0.16 -0.6 684,552 - MMP_RS03640 0.55 -3.1 684,631 - MMP_RS03640 0.67 -2.8 684,631 - MMP_RS03640 0.67 -5.5 684,682 - MMP_RS03640 0.75 -4.0 684,686 - MMP_RS03640 0.76 -3.8 684,860 + -0.8 684,860 + -0.4 684,862 - -1.0 684,875 + -1.5 684,893 + +0.0 684,943 - +0.4 684,944 + +1.0 684,944 + -0.7 684,966 + -2.4 684,983 + -2.2 685,193 + +0.0 685,699 - -3.0 685,701 - -1.2 685,772 + -4.0 685,944 - -2.2 686,003 + -2.2 686,006 + -1.2 686,209 - -1.9 686,341 + -3.9 686,393 + -3.2 686,397 - -2.7 686,397 - -2.4 686,406 - -1.7 686,406 - -3.0 686,406 - -2.0 686,410 - -2.1 686,421 - +0.8 686,422 + -0.5 686,422 + -3.7 686,422 + -2.5 686,429 - -3.8 686,430 + -4.2 686,430 + -2.6 686,442 - -0.6 686,454 + -2.8 686,464 + -2.7 686,476 - -3.5
Or see this region's nucleotide sequence