Experiment: H2 N-free with 10mM L-Aspartic Acid
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS03495 and MMP_RS03500 are separated by 368 nucleotides MMP_RS03500 and MMP_RS03505 are separated by 29 nucleotides MMP_RS03505 and MMP_RS03510 are separated by 12 nucleotides
MMP_RS03495: MMP_RS03495 - Na/Pi cotransporter family protein, at 655,139 to 656,764
_RS03495
MMP_RS03500: MMP_RS03500 - 30S ribosomal protein S2, at 657,133 to 657,795
_RS03500
MMP_RS03505: MMP_RS03505 - hypothetical protein, at 657,825 to 658,433
_RS03505
MMP_RS03510: MMP_RS03510 - 30S ribosomal protein S3ae, at 658,446 to 659,123
_RS03510
Position (kb)
657
658 Strain fitness (log2 ratio)
-1
0
1
2 at 656.178 kb on + strand, within MMP_RS03495 at 656.268 kb on + strand, within MMP_RS03495 at 656.307 kb on + strand, within MMP_RS03495 at 656.340 kb on + strand, within MMP_RS03495 at 656.713 kb on + strand at 656.747 kb on - strand at 656.749 kb on - strand at 656.750 kb on + strand at 656.750 kb on + strand at 656.778 kb on + strand at 656.779 kb on - strand at 656.795 kb on - strand at 656.835 kb on - strand at 656.838 kb on - strand at 656.914 kb on - strand at 656.926 kb on - strand at 656.977 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 10mM L-Aspartic Acid remove 656,178 + MMP_RS03495 0.64 -0.0 656,268 + MMP_RS03495 0.69 +0.4 656,307 + MMP_RS03495 0.72 -0.7 656,340 + MMP_RS03495 0.74 +0.5 656,713 + +0.7 656,747 - +1.8 656,749 - +0.1 656,750 + -0.0 656,750 + +0.9 656,778 + +0.2 656,779 - -0.6 656,795 - +1.0 656,835 - +0.6 656,838 - -0.5 656,914 - -0.6 656,926 - +0.5 656,977 - -0.7
Or see this region's nucleotide sequence