Experiment: H2 N-free with 10mM L-Aspartic Acid
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS02660 and MMP_RS02665 are separated by 411 nucleotides MMP_RS02665 and MMP_RS02670 are separated by 55 nucleotides
MMP_RS02660: MMP_RS02660 - hypothetical protein, at 506,485 to 507,573
_RS02660
MMP_RS02665: MMP_RS02665 - hypothetical protein, at 507,985 to 508,290
_RS02665
MMP_RS02670: MMP_RS02670 - ATP-binding cassette domain-containing protein, at 508,346 to 509,377
_RS02670
Position (kb) 507
508
509 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 507.000 kb on - strand, within MMP_RS02660 at 507.001 kb on + strand, within MMP_RS02660 at 507.015 kb on - strand, within MMP_RS02660 at 507.016 kb on + strand, within MMP_RS02660 at 507.063 kb on + strand, within MMP_RS02660 at 507.070 kb on - strand, within MMP_RS02660 at 507.071 kb on + strand, within MMP_RS02660 at 507.091 kb on - strand, within MMP_RS02660 at 507.096 kb on - strand, within MMP_RS02660 at 507.097 kb on + strand, within MMP_RS02660 at 507.102 kb on - strand, within MMP_RS02660 at 507.128 kb on - strand, within MMP_RS02660 at 507.129 kb on + strand, within MMP_RS02660 at 507.137 kb on + strand, within MMP_RS02660 at 507.150 kb on - strand, within MMP_RS02660 at 507.234 kb on - strand, within MMP_RS02660 at 507.234 kb on - strand, within MMP_RS02660 at 507.234 kb on - strand, within MMP_RS02660 at 507.234 kb on - strand, within MMP_RS02660 at 507.234 kb on - strand, within MMP_RS02660 at 507.234 kb on - strand, within MMP_RS02660 at 507.235 kb on + strand, within MMP_RS02660 at 507.235 kb on + strand, within MMP_RS02660 at 507.250 kb on - strand, within MMP_RS02660 at 507.250 kb on - strand, within MMP_RS02660 at 507.250 kb on - strand, within MMP_RS02660 at 507.251 kb on + strand, within MMP_RS02660 at 507.253 kb on - strand, within MMP_RS02660 at 507.254 kb on + strand, within MMP_RS02660 at 507.254 kb on + strand, within MMP_RS02660 at 507.256 kb on + strand, within MMP_RS02660 at 507.303 kb on - strand, within MMP_RS02660 at 507.316 kb on + strand, within MMP_RS02660 at 507.316 kb on + strand, within MMP_RS02660 at 507.316 kb on + strand, within MMP_RS02660 at 507.318 kb on - strand, within MMP_RS02660 at 507.320 kb on - strand, within MMP_RS02660 at 507.331 kb on - strand, within MMP_RS02660 at 507.356 kb on - strand, within MMP_RS02660 at 507.357 kb on + strand, within MMP_RS02660 at 507.360 kb on - strand, within MMP_RS02660 at 507.360 kb on - strand, within MMP_RS02660 at 507.360 kb on - strand, within MMP_RS02660 at 507.392 kb on + strand, within MMP_RS02660 at 507.407 kb on + strand, within MMP_RS02660 at 507.412 kb on - strand, within MMP_RS02660 at 507.464 kb on + strand, within MMP_RS02660 at 507.556 kb on + strand at 507.603 kb on - strand at 507.604 kb on + strand at 507.626 kb on + strand at 507.696 kb on + strand at 507.733 kb on + strand at 507.753 kb on - strand at 507.761 kb on - strand at 507.762 kb on + strand at 507.764 kb on + strand at 507.812 kb on + strand at 507.826 kb on + strand at 507.878 kb on - strand at 508.288 kb on - strand at 508.293 kb on + strand at 508.304 kb on + strand at 508.375 kb on + strand at 508.448 kb on - strand at 508.448 kb on - strand at 508.449 kb on + strand at 508.449 kb on + strand at 508.523 kb on - strand, within MMP_RS02670 at 508.558 kb on - strand, within MMP_RS02670 at 508.558 kb on - strand, within MMP_RS02670 at 508.645 kb on + strand, within MMP_RS02670 at 508.730 kb on - strand, within MMP_RS02670 at 508.754 kb on + strand, within MMP_RS02670 at 508.761 kb on + strand, within MMP_RS02670 at 508.761 kb on + strand, within MMP_RS02670 at 508.778 kb on - strand, within MMP_RS02670 at 508.779 kb on + strand, within MMP_RS02670 at 508.832 kb on - strand, within MMP_RS02670 at 508.833 kb on + strand, within MMP_RS02670 at 508.835 kb on + strand, within MMP_RS02670 at 508.869 kb on + strand, within MMP_RS02670 at 508.875 kb on - strand, within MMP_RS02670 at 508.895 kb on - strand, within MMP_RS02670 at 508.896 kb on + strand, within MMP_RS02670 at 508.949 kb on - strand, within MMP_RS02670 at 509.047 kb on - strand, within MMP_RS02670 at 509.048 kb on + strand, within MMP_RS02670
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 10mM L-Aspartic Acid remove 507,000 - MMP_RS02660 0.47 -0.7 507,001 + MMP_RS02660 0.47 +1.0 507,015 - MMP_RS02660 0.49 -0.2 507,016 + MMP_RS02660 0.49 +0.2 507,063 + MMP_RS02660 0.53 -1.2 507,070 - MMP_RS02660 0.54 +0.3 507,071 + MMP_RS02660 0.54 -0.4 507,091 - MMP_RS02660 0.56 +0.3 507,096 - MMP_RS02660 0.56 +1.0 507,097 + MMP_RS02660 0.56 -1.8 507,102 - MMP_RS02660 0.57 -0.1 507,128 - MMP_RS02660 0.59 +0.1 507,129 + MMP_RS02660 0.59 +0.3 507,137 + MMP_RS02660 0.60 -1.0 507,150 - MMP_RS02660 0.61 +0.2 507,234 - MMP_RS02660 0.69 +0.3 507,234 - MMP_RS02660 0.69 +0.9 507,234 - MMP_RS02660 0.69 +0.6 507,234 - MMP_RS02660 0.69 -0.5 507,234 - MMP_RS02660 0.69 +0.1 507,234 - MMP_RS02660 0.69 -0.4 507,235 + MMP_RS02660 0.69 +0.1 507,235 + MMP_RS02660 0.69 +0.2 507,250 - MMP_RS02660 0.70 -0.8 507,250 - MMP_RS02660 0.70 -0.0 507,250 - MMP_RS02660 0.70 +0.0 507,251 + MMP_RS02660 0.70 +0.7 507,253 - MMP_RS02660 0.71 +0.8 507,254 + MMP_RS02660 0.71 -1.4 507,254 + MMP_RS02660 0.71 +0.9 507,256 + MMP_RS02660 0.71 +0.2 507,303 - MMP_RS02660 0.75 -0.6 507,316 + MMP_RS02660 0.76 -0.2 507,316 + MMP_RS02660 0.76 +0.2 507,316 + MMP_RS02660 0.76 -1.0 507,318 - MMP_RS02660 0.76 -0.7 507,320 - MMP_RS02660 0.77 +0.0 507,331 - MMP_RS02660 0.78 +0.7 507,356 - MMP_RS02660 0.80 +0.9 507,357 + MMP_RS02660 0.80 +0.7 507,360 - MMP_RS02660 0.80 -0.5 507,360 - MMP_RS02660 0.80 +0.0 507,360 - MMP_RS02660 0.80 +0.6 507,392 + MMP_RS02660 0.83 +0.2 507,407 + MMP_RS02660 0.85 -0.8 507,412 - MMP_RS02660 0.85 +1.3 507,464 + MMP_RS02660 0.90 +0.2 507,556 + -0.3 507,603 - -0.8 507,604 + -1.3 507,626 + -0.1 507,696 + +0.1 507,733 + -0.0 507,753 - -0.6 507,761 - -0.4 507,762 + +1.0 507,764 + -0.2 507,812 + -0.0 507,826 + +0.9 507,878 - +0.5 508,288 - -0.5 508,293 + +0.2 508,304 + +0.3 508,375 + -5.8 508,448 - -4.6 508,448 - -3.5 508,449 + -3.8 508,449 + -2.0 508,523 - MMP_RS02670 0.17 -3.8 508,558 - MMP_RS02670 0.21 -3.5 508,558 - MMP_RS02670 0.21 -4.4 508,645 + MMP_RS02670 0.29 -3.9 508,730 - MMP_RS02670 0.37 -4.3 508,754 + MMP_RS02670 0.40 -2.1 508,761 + MMP_RS02670 0.40 -3.5 508,761 + MMP_RS02670 0.40 -3.1 508,778 - MMP_RS02670 0.42 -5.6 508,779 + MMP_RS02670 0.42 -4.0 508,832 - MMP_RS02670 0.47 -5.5 508,833 + MMP_RS02670 0.47 -4.0 508,835 + MMP_RS02670 0.47 -4.1 508,869 + MMP_RS02670 0.51 -3.4 508,875 - MMP_RS02670 0.51 -5.2 508,895 - MMP_RS02670 0.53 -3.8 508,896 + MMP_RS02670 0.53 -4.3 508,949 - MMP_RS02670 0.58 -2.2 509,047 - MMP_RS02670 0.68 -3.9 509,048 + MMP_RS02670 0.68 -4.3
Or see this region's nucleotide sequence