Strain Fitness in Methanococcus maripaludis S2 around MMP_RS01740

Experiment: H2 N-free with 10mM L-Aspartic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMMP_RS01735 and MMP_RS01740 are separated by 206 nucleotidesMMP_RS01740 and MMP_RS01745 are separated by 135 nucleotides MMP_RS01735: MMP_RS01735 - type II glyceraldehyde-3-phosphate dehydrogenase, at 321,169 to 322,191 _RS01735 MMP_RS01740: MMP_RS01740 - methionine--tRNA ligase, at 322,398 to 324,389 _RS01740 MMP_RS01745: MMP_RS01745 - AMP phosphorylase, at 324,525 to 326,042 _RS01745 Position (kb) 322 323 324 325Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 321.951 kb on - strandat 321.952 kb on + strandat 322.226 kb on - strandat 322.258 kb on - strandat 322.262 kb on - strandat 322.265 kb on + strandat 322.271 kb on - strandat 322.272 kb on + strandat 322.275 kb on - strandat 322.276 kb on + strandat 322.277 kb on - strandat 322.280 kb on - strandat 322.285 kb on - strandat 322.286 kb on + strandat 322.287 kb on - strandat 322.288 kb on + strandat 322.327 kb on + strandat 322.328 kb on - strandat 322.409 kb on + strandat 322.413 kb on + strandat 322.428 kb on - strandat 322.920 kb on + strandat 323.802 kb on - strandat 323.842 kb on - strandat 323.945 kb on + strandat 323.945 kb on + strandat 323.948 kb on - strandat 323.970 kb on + strandat 324.212 kb on + strandat 324.220 kb on + strandat 324.332 kb on - strandat 324.337 kb on - strandat 324.337 kb on - strandat 324.390 kb on - strandat 324.406 kb on - strandat 324.459 kb on - strandat 324.468 kb on - strandat 324.485 kb on - strandat 324.550 kb on - strandat 324.637 kb on - strandat 324.767 kb on + strand, within MMP_RS01745at 324.918 kb on - strand, within MMP_RS01745at 324.920 kb on - strand, within MMP_RS01745at 325.025 kb on - strand, within MMP_RS01745at 325.072 kb on - strand, within MMP_RS01745

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Per-strain Table

Position Strand Gene LocusTag Fraction H2 N-free with 10mM L-Aspartic Acid
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321,951 - -2.9
321,952 + -1.5
322,226 - -1.9
322,258 - +1.4
322,262 - -1.0
322,265 + -0.9
322,271 - +1.1
322,272 + -0.3
322,275 - +1.4
322,276 + +0.3
322,277 - +0.2
322,280 - +1.1
322,285 - +0.8
322,286 + -0.1
322,287 - +0.6
322,288 + +0.7
322,327 + -1.4
322,328 - -3.1
322,409 + -0.3
322,413 + -1.3
322,428 - -3.9
322,920 + -1.8
323,802 - -1.9
323,842 - -1.1
323,945 + -1.7
323,945 + -2.5
323,948 - -2.1
323,970 + -2.3
324,212 + -3.6
324,220 + +0.1
324,332 - -3.0
324,337 - -0.5
324,337 - +0.3
324,390 - -0.7
324,406 - -0.2
324,459 - +0.3
324,468 - +1.3
324,485 - +0.8
324,550 - +0.8
324,637 - +0.1
324,767 + MMP_RS01745 0.16 +0.5
324,918 - MMP_RS01745 0.26 +1.1
324,920 - MMP_RS01745 0.26 +0.1
325,025 - MMP_RS01745 0.33 +1.0
325,072 - MMP_RS01745 0.36 -1.3

Or see this region's nucleotide sequence