Experiment: H2 N-free with 10mM L-Aspartic Acid
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS00185 and MMP_RS00190 are separated by 72 nucleotides MMP_RS00190 and MMP_RS00195 are separated by 64 nucleotides MMP_RS00195 and MMP_RS00200 are separated by 223 nucleotides
MMP_RS00185: MMP_RS00185 - potassium channel protein, at 42,181 to 43,188
_RS00185
MMP_RS00190: MMP_RS00190 - cobyrinic acid a c-diamide synthase, at 43,261 to 44,712
_RS00190
MMP_RS00195: MMP_RS00195 - DUF4013 domain-containing protein, at 44,777 to 45,415
_RS00195
MMP_RS00200: MMP_RS00200 - minichromosome maintenance protein MCM, at 45,639 to 47,657
_RS00200
Position (kb) 43
44
45 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 42.321 kb on - strand, within MMP_RS00185 at 42.324 kb on - strand, within MMP_RS00185 at 42.324 kb on - strand, within MMP_RS00185 at 42.325 kb on + strand, within MMP_RS00185 at 42.414 kb on + strand, within MMP_RS00185 at 42.419 kb on - strand, within MMP_RS00185 at 42.429 kb on - strand, within MMP_RS00185 at 42.429 kb on - strand, within MMP_RS00185 at 42.430 kb on + strand, within MMP_RS00185 at 42.505 kb on + strand, within MMP_RS00185 at 42.622 kb on + strand, within MMP_RS00185 at 42.625 kb on - strand, within MMP_RS00185 at 42.625 kb on - strand, within MMP_RS00185 at 42.626 kb on + strand, within MMP_RS00185 at 42.626 kb on + strand, within MMP_RS00185 at 42.626 kb on + strand, within MMP_RS00185 at 42.626 kb on + strand, within MMP_RS00185 at 42.631 kb on + strand, within MMP_RS00185 at 42.677 kb on + strand, within MMP_RS00185 at 42.688 kb on - strand, within MMP_RS00185 at 42.689 kb on + strand, within MMP_RS00185 at 42.691 kb on - strand, within MMP_RS00185 at 42.723 kb on - strand, within MMP_RS00185 at 42.723 kb on - strand, within MMP_RS00185 at 42.724 kb on + strand, within MMP_RS00185 at 42.726 kb on + strand, within MMP_RS00185 at 42.775 kb on + strand, within MMP_RS00185 at 42.823 kb on - strand, within MMP_RS00185 at 42.924 kb on + strand, within MMP_RS00185 at 42.961 kb on + strand, within MMP_RS00185 at 42.972 kb on - strand, within MMP_RS00185 at 42.990 kb on - strand, within MMP_RS00185 at 43.087 kb on - strand, within MMP_RS00185 at 43.088 kb on + strand at 43.108 kb on + strand at 43.109 kb on - strand at 43.109 kb on - strand at 43.109 kb on - strand at 43.109 kb on - strand at 43.109 kb on - strand at 43.109 kb on - strand at 43.110 kb on + strand at 43.110 kb on + strand at 43.137 kb on - strand at 43.138 kb on + strand at 43.138 kb on + strand at 43.138 kb on + strand at 43.147 kb on - strand at 43.148 kb on + strand at 43.148 kb on + strand at 43.150 kb on - strand at 43.168 kb on + strand at 43.203 kb on - strand at 43.207 kb on - strand at 43.207 kb on - strand at 43.208 kb on + strand at 43.210 kb on + strand at 43.217 kb on - strand at 43.219 kb on - strand at 43.219 kb on - strand at 43.219 kb on - strand at 43.219 kb on - strand at 43.219 kb on - strand at 43.219 kb on - strand at 43.219 kb on - strand at 43.219 kb on - strand at 43.219 kb on - strand at 43.220 kb on + strand at 43.220 kb on + strand at 43.220 kb on + strand at 43.220 kb on + strand at 43.220 kb on + strand at 43.220 kb on + strand at 43.221 kb on - strand at 43.221 kb on - strand at 43.221 kb on - strand at 43.221 kb on - strand at 43.222 kb on + strand at 43.222 kb on + strand at 43.222 kb on + strand at 43.227 kb on + strand at 43.234 kb on + strand at 43.235 kb on - strand at 43.236 kb on + strand at 43.237 kb on - strand at 43.237 kb on - strand at 43.237 kb on - strand at 43.362 kb on + strand at 43.459 kb on - strand at 43.460 kb on + strand at 43.460 kb on + strand at 43.460 kb on + strand at 43.473 kb on + strand at 43.510 kb on + strand at 43.538 kb on - strand at 43.538 kb on - strand at 43.538 kb on - strand at 43.560 kb on + strand at 43.581 kb on + strand at 43.969 kb on + strand at 44.097 kb on - strand at 44.112 kb on + strand at 44.130 kb on - strand at 44.131 kb on + strand at 44.156 kb on - strand at 44.157 kb on + strand at 44.227 kb on + strand at 44.230 kb on + strand at 44.231 kb on - strand at 44.231 kb on - strand at 44.232 kb on + strand at 44.268 kb on - strand at 44.268 kb on - strand at 44.318 kb on - strand at 44.321 kb on + strand at 44.323 kb on + strand at 44.491 kb on + strand at 44.535 kb on - strand at 44.535 kb on - strand at 44.536 kb on + strand at 44.546 kb on - strand at 44.613 kb on + strand at 44.613 kb on + strand at 44.656 kb on + strand at 44.700 kb on + strand at 44.703 kb on - strand at 44.743 kb on - strand at 44.811 kb on - strand at 44.813 kb on - strand at 44.813 kb on - strand at 44.814 kb on + strand at 44.841 kb on + strand, within MMP_RS00195 at 44.909 kb on - strand, within MMP_RS00195 at 44.910 kb on + strand, within MMP_RS00195 at 44.916 kb on + strand, within MMP_RS00195 at 44.919 kb on - strand, within MMP_RS00195 at 44.919 kb on - strand, within MMP_RS00195 at 44.920 kb on + strand, within MMP_RS00195 at 44.924 kb on - strand, within MMP_RS00195 at 44.924 kb on - strand, within MMP_RS00195 at 44.924 kb on - strand, within MMP_RS00195 at 44.927 kb on - strand, within MMP_RS00195 at 44.927 kb on - strand, within MMP_RS00195 at 44.927 kb on - strand, within MMP_RS00195 at 44.928 kb on + strand, within MMP_RS00195 at 44.929 kb on - strand, within MMP_RS00195 at 44.930 kb on + strand, within MMP_RS00195 at 44.930 kb on + strand, within MMP_RS00195 at 44.930 kb on + strand, within MMP_RS00195 at 44.930 kb on + strand, within MMP_RS00195 at 44.932 kb on + strand, within MMP_RS00195 at 44.945 kb on + strand, within MMP_RS00195 at 44.978 kb on + strand, within MMP_RS00195 at 45.010 kb on + strand, within MMP_RS00195 at 45.025 kb on - strand, within MMP_RS00195 at 45.045 kb on + strand, within MMP_RS00195 at 45.060 kb on + strand, within MMP_RS00195 at 45.063 kb on + strand, within MMP_RS00195 at 45.066 kb on + strand, within MMP_RS00195 at 45.076 kb on - strand, within MMP_RS00195 at 45.076 kb on - strand, within MMP_RS00195 at 45.076 kb on - strand, within MMP_RS00195 at 45.076 kb on - strand, within MMP_RS00195 at 45.080 kb on + strand, within MMP_RS00195 at 45.080 kb on + strand, within MMP_RS00195 at 45.124 kb on - strand, within MMP_RS00195 at 45.155 kb on - strand, within MMP_RS00195 at 45.163 kb on - strand, within MMP_RS00195 at 45.163 kb on - strand, within MMP_RS00195 at 45.163 kb on - strand, within MMP_RS00195 at 45.163 kb on - strand, within MMP_RS00195 at 45.164 kb on + strand, within MMP_RS00195 at 45.164 kb on + strand, within MMP_RS00195 at 45.167 kb on - strand, within MMP_RS00195 at 45.168 kb on + strand, within MMP_RS00195 at 45.184 kb on - strand, within MMP_RS00195 at 45.184 kb on - strand, within MMP_RS00195 at 45.184 kb on - strand, within MMP_RS00195 at 45.185 kb on + strand, within MMP_RS00195 at 45.185 kb on + strand, within MMP_RS00195 at 45.185 kb on + strand, within MMP_RS00195 at 45.185 kb on + strand, within MMP_RS00195 at 45.185 kb on + strand, within MMP_RS00195 at 45.185 kb on + strand, within MMP_RS00195 at 45.185 kb on + strand, within MMP_RS00195 at 45.185 kb on + strand, within MMP_RS00195 at 45.185 kb on + strand, within MMP_RS00195 at 45.185 kb on + strand, within MMP_RS00195 at 45.185 kb on + strand, within MMP_RS00195 at 45.186 kb on - strand, within MMP_RS00195 at 45.186 kb on - strand, within MMP_RS00195 at 45.186 kb on - strand, within MMP_RS00195 at 45.186 kb on - strand, within MMP_RS00195 at 45.186 kb on - strand, within MMP_RS00195 at 45.186 kb on - strand, within MMP_RS00195 at 45.186 kb on - strand, within MMP_RS00195 at 45.187 kb on + strand, within MMP_RS00195 at 45.187 kb on + strand, within MMP_RS00195 at 45.187 kb on + strand, within MMP_RS00195 at 45.187 kb on + strand, within MMP_RS00195 at 45.187 kb on + strand, within MMP_RS00195 at 45.187 kb on + strand, within MMP_RS00195 at 45.187 kb on + strand, within MMP_RS00195 at 45.187 kb on + strand, within MMP_RS00195 at 45.187 kb on + strand, within MMP_RS00195 at 45.187 kb on + strand, within MMP_RS00195 at 45.187 kb on + strand, within MMP_RS00195 at 45.187 kb on + strand, within MMP_RS00195 at 45.187 kb on + strand, within MMP_RS00195 at 45.187 kb on + strand, within MMP_RS00195 at 45.187 kb on + strand, within MMP_RS00195 at 45.187 kb on + strand, within MMP_RS00195 at 45.187 kb on + strand, within MMP_RS00195 at 45.187 kb on + strand, within MMP_RS00195 at 45.187 kb on + strand, within MMP_RS00195 at 45.187 kb on + strand, within MMP_RS00195 at 45.188 kb on - strand, within MMP_RS00195 at 45.188 kb on - strand, within MMP_RS00195 at 45.188 kb on - strand, within MMP_RS00195 at 45.188 kb on - strand, within MMP_RS00195 at 45.189 kb on + strand, within MMP_RS00195 at 45.189 kb on + strand, within MMP_RS00195 at 45.189 kb on + strand, within MMP_RS00195 at 45.189 kb on + strand, within MMP_RS00195 at 45.189 kb on + strand, within MMP_RS00195 at 45.191 kb on - strand, within MMP_RS00195 at 45.191 kb on - strand, within MMP_RS00195 at 45.192 kb on + strand, within MMP_RS00195 at 45.192 kb on + strand, within MMP_RS00195 at 45.193 kb on - strand, within MMP_RS00195 at 45.194 kb on + strand, within MMP_RS00195 at 45.194 kb on + strand, within MMP_RS00195 at 45.195 kb on - strand, within MMP_RS00195 at 45.195 kb on - strand, within MMP_RS00195 at 45.195 kb on - strand, within MMP_RS00195 at 45.195 kb on - strand, within MMP_RS00195 at 45.196 kb on + strand, within MMP_RS00195 at 45.196 kb on + strand, within MMP_RS00195 at 45.201 kb on + strand, within MMP_RS00195 at 45.221 kb on - strand, within MMP_RS00195 at 45.276 kb on + strand, within MMP_RS00195 at 45.394 kb on - strand at 45.428 kb on - strand at 45.434 kb on + strand at 45.457 kb on - strand at 45.458 kb on + strand at 45.536 kb on + strand at 45.569 kb on - strand at 45.569 kb on - strand at 45.586 kb on + strand at 45.588 kb on - strand at 45.589 kb on + strand at 45.590 kb on - strand at 45.591 kb on + strand at 45.591 kb on + strand at 45.593 kb on + strand at 45.593 kb on + strand at 45.593 kb on + strand at 45.607 kb on + strand at 45.607 kb on + strand at 45.607 kb on + strand at 45.607 kb on + strand at 45.609 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 10mM L-Aspartic Acid remove 42,321 - MMP_RS00185 0.14 +1.4 42,324 - MMP_RS00185 0.14 +1.6 42,324 - MMP_RS00185 0.14 +0.8 42,325 + MMP_RS00185 0.14 +1.0 42,414 + MMP_RS00185 0.23 +1.6 42,419 - MMP_RS00185 0.24 +1.0 42,429 - MMP_RS00185 0.25 +0.2 42,429 - MMP_RS00185 0.25 +0.5 42,430 + MMP_RS00185 0.25 +1.0 42,505 + MMP_RS00185 0.32 +1.0 42,622 + MMP_RS00185 0.44 +1.6 42,625 - MMP_RS00185 0.44 +0.4 42,625 - MMP_RS00185 0.44 +1.3 42,626 + MMP_RS00185 0.44 +1.5 42,626 + MMP_RS00185 0.44 +1.3 42,626 + MMP_RS00185 0.44 +2.0 42,626 + MMP_RS00185 0.44 +1.1 42,631 + MMP_RS00185 0.45 +0.3 42,677 + MMP_RS00185 0.49 +0.9 42,688 - MMP_RS00185 0.50 +1.7 42,689 + MMP_RS00185 0.50 +1.5 42,691 - MMP_RS00185 0.51 +2.0 42,723 - MMP_RS00185 0.54 +0.6 42,723 - MMP_RS00185 0.54 +1.4 42,724 + MMP_RS00185 0.54 +1.1 42,726 + MMP_RS00185 0.54 +1.2 42,775 + MMP_RS00185 0.59 +1.9 42,823 - MMP_RS00185 0.64 -0.2 42,924 + MMP_RS00185 0.74 +1.5 42,961 + MMP_RS00185 0.77 +0.9 42,972 - MMP_RS00185 0.78 +1.5 42,990 - MMP_RS00185 0.80 +1.3 43,087 - MMP_RS00185 0.90 +1.4 43,088 + +1.0 43,108 + +1.1 43,109 - +1.8 43,109 - +1.8 43,109 - +1.0 43,109 - +1.6 43,109 - +2.0 43,109 - +1.1 43,110 + +0.8 43,110 + +1.6 43,137 - +1.7 43,138 + +1.2 43,138 + +0.6 43,138 + +1.4 43,147 - +1.4 43,148 + +1.2 43,148 + +1.5 43,150 - +0.9 43,168 + +0.4 43,203 - +0.8 43,207 - -0.0 43,207 - +1.5 43,208 + +1.4 43,210 + +0.6 43,217 - +0.9 43,219 - +0.5 43,219 - +0.6 43,219 - +0.7 43,219 - +2.8 43,219 - +0.9 43,219 - +1.0 43,219 - +0.8 43,219 - -0.5 43,219 - +0.7 43,220 + +1.6 43,220 + +1.3 43,220 + +0.6 43,220 + +0.3 43,220 + +1.2 43,220 + -0.1 43,221 - -1.3 43,221 - -0.2 43,221 - -0.7 43,221 - -1.0 43,222 + -1.3 43,222 + +1.3 43,222 + +2.1 43,227 + +0.1 43,234 + +0.7 43,235 - -2.2 43,236 + +1.1 43,237 - -2.4 43,237 - -0.9 43,237 - -2.0 43,362 + -2.2 43,459 - -3.2 43,460 + -3.5 43,460 + -2.9 43,460 + -0.9 43,473 + -4.5 43,510 + -0.4 43,538 - -0.2 43,538 - -2.7 43,538 - -2.5 43,560 + -1.0 43,581 + -1.8 43,969 + -3.9 44,097 - -3.9 44,112 + -5.1 44,130 - -4.3 44,131 + -2.0 44,156 - -3.2 44,157 + -1.2 44,227 + -2.4 44,230 + -4.0 44,231 - -3.7 44,231 - -3.4 44,232 + -2.7 44,268 - -1.7 44,268 - -4.8 44,318 - -4.8 44,321 + -0.3 44,323 + -2.9 44,491 + -1.6 44,535 - -1.5 44,535 - -2.2 44,536 + -1.1 44,546 - -1.2 44,613 + -0.9 44,613 + -3.2 44,656 + -1.8 44,700 + +0.8 44,703 - +0.3 44,743 - +0.7 44,811 - +0.4 44,813 - -0.2 44,813 - +1.6 44,814 + +0.7 44,841 + MMP_RS00195 0.10 +0.1 44,909 - MMP_RS00195 0.21 +0.7 44,910 + MMP_RS00195 0.21 +1.1 44,916 + MMP_RS00195 0.22 +0.5 44,919 - MMP_RS00195 0.22 +1.2 44,919 - MMP_RS00195 0.22 -0.5 44,920 + MMP_RS00195 0.22 +1.3 44,924 - MMP_RS00195 0.23 +0.3 44,924 - MMP_RS00195 0.23 +0.2 44,924 - MMP_RS00195 0.23 -0.4 44,927 - MMP_RS00195 0.23 -0.5 44,927 - MMP_RS00195 0.23 -0.4 44,927 - MMP_RS00195 0.23 -0.9 44,928 + MMP_RS00195 0.24 +0.5 44,929 - MMP_RS00195 0.24 +0.1 44,930 + MMP_RS00195 0.24 -0.6 44,930 + MMP_RS00195 0.24 +0.7 44,930 + MMP_RS00195 0.24 +1.2 44,930 + MMP_RS00195 0.24 +0.2 44,932 + MMP_RS00195 0.24 -1.2 44,945 + MMP_RS00195 0.26 +0.0 44,978 + MMP_RS00195 0.31 -0.7 45,010 + MMP_RS00195 0.36 +0.9 45,025 - MMP_RS00195 0.39 +1.6 45,045 + MMP_RS00195 0.42 +0.2 45,060 + MMP_RS00195 0.44 +1.4 45,063 + MMP_RS00195 0.45 +1.2 45,066 + MMP_RS00195 0.45 +0.0 45,076 - MMP_RS00195 0.47 -0.1 45,076 - MMP_RS00195 0.47 +0.7 45,076 - MMP_RS00195 0.47 +1.3 45,076 - MMP_RS00195 0.47 -0.3 45,080 + MMP_RS00195 0.47 +0.7 45,080 + MMP_RS00195 0.47 +0.1 45,124 - MMP_RS00195 0.54 +0.9 45,155 - MMP_RS00195 0.59 -1.2 45,163 - MMP_RS00195 0.60 +0.6 45,163 - MMP_RS00195 0.60 +0.9 45,163 - MMP_RS00195 0.60 +0.0 45,163 - MMP_RS00195 0.60 +1.5 45,164 + MMP_RS00195 0.61 +1.1 45,164 + MMP_RS00195 0.61 +0.8 45,167 - MMP_RS00195 0.61 -0.1 45,168 + MMP_RS00195 0.61 +0.9 45,184 - MMP_RS00195 0.64 +0.2 45,184 - MMP_RS00195 0.64 +1.2 45,184 - MMP_RS00195 0.64 +1.1 45,185 + MMP_RS00195 0.64 +0.3 45,185 + MMP_RS00195 0.64 -0.7 45,185 + MMP_RS00195 0.64 -0.6 45,185 + MMP_RS00195 0.64 +0.5 45,185 + MMP_RS00195 0.64 +0.7 45,185 + MMP_RS00195 0.64 -0.4 45,185 + MMP_RS00195 0.64 +0.4 45,185 + MMP_RS00195 0.64 +1.9 45,185 + MMP_RS00195 0.64 +0.8 45,185 + MMP_RS00195 0.64 +0.2 45,185 + MMP_RS00195 0.64 +0.4 45,186 - MMP_RS00195 0.64 +1.3 45,186 - MMP_RS00195 0.64 +0.6 45,186 - MMP_RS00195 0.64 +0.7 45,186 - MMP_RS00195 0.64 -0.7 45,186 - MMP_RS00195 0.64 +0.4 45,186 - MMP_RS00195 0.64 +0.3 45,186 - MMP_RS00195 0.64 +0.3 45,187 + MMP_RS00195 0.64 +0.6 45,187 + MMP_RS00195 0.64 +0.5 45,187 + MMP_RS00195 0.64 +0.9 45,187 + MMP_RS00195 0.64 +0.3 45,187 + MMP_RS00195 0.64 -0.7 45,187 + MMP_RS00195 0.64 +0.4 45,187 + MMP_RS00195 0.64 +0.3 45,187 + MMP_RS00195 0.64 +2.1 45,187 + MMP_RS00195 0.64 +0.0 45,187 + MMP_RS00195 0.64 +0.1 45,187 + MMP_RS00195 0.64 +0.4 45,187 + MMP_RS00195 0.64 +0.6 45,187 + MMP_RS00195 0.64 +0.1 45,187 + MMP_RS00195 0.64 +0.3 45,187 + MMP_RS00195 0.64 +0.3 45,187 + MMP_RS00195 0.64 +0.2 45,187 + MMP_RS00195 0.64 +1.3 45,187 + MMP_RS00195 0.64 +1.1 45,187 + MMP_RS00195 0.64 +0.3 45,187 + MMP_RS00195 0.64 +0.6 45,188 - MMP_RS00195 0.64 +1.0 45,188 - MMP_RS00195 0.64 +0.4 45,188 - MMP_RS00195 0.64 +0.0 45,188 - MMP_RS00195 0.64 +0.2 45,189 + MMP_RS00195 0.64 +0.4 45,189 + MMP_RS00195 0.64 +0.9 45,189 + MMP_RS00195 0.64 +0.2 45,189 + MMP_RS00195 0.64 -0.4 45,189 + MMP_RS00195 0.64 +0.2 45,191 - MMP_RS00195 0.65 +0.0 45,191 - MMP_RS00195 0.65 -0.1 45,192 + MMP_RS00195 0.65 -0.1 45,192 + MMP_RS00195 0.65 +0.2 45,193 - MMP_RS00195 0.65 -0.2 45,194 + MMP_RS00195 0.65 +0.2 45,194 + MMP_RS00195 0.65 +1.2 45,195 - MMP_RS00195 0.65 +1.0 45,195 - MMP_RS00195 0.65 +0.1 45,195 - MMP_RS00195 0.65 +0.3 45,195 - MMP_RS00195 0.65 -0.3 45,196 + MMP_RS00195 0.66 +0.7 45,196 + MMP_RS00195 0.66 +0.0 45,201 + MMP_RS00195 0.66 -0.2 45,221 - MMP_RS00195 0.69 -1.4 45,276 + MMP_RS00195 0.78 +1.4 45,394 - -0.4 45,428 - +0.5 45,434 + -0.9 45,457 - +1.0 45,458 + +0.3 45,536 + +0.6 45,569 - +1.5 45,569 - +0.1 45,586 + +0.6 45,588 - +1.0 45,589 + +0.3 45,590 - -3.0 45,591 + +0.9 45,591 + -0.2 45,593 + +0.4 45,593 + -1.3 45,593 + -0.9 45,607 + -2.4 45,607 + +0.3 45,607 + +0.4 45,607 + +0.4 45,609 + -0.3
Or see this region's nucleotide sequence