Experiment: H2 N-free with 10mM L-Aspartic Acid
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS00170 and MMP_RS00175 are separated by 100 nucleotides MMP_RS00175 and MMP_RS00180 are separated by 54 nucleotides MMP_RS00180 and MMP_RS00185 are separated by 229 nucleotides
MMP_RS00170: MMP_RS00170 - 23S ribosomal RNA, at 37,290 to 40,257
_RS00170
MMP_RS00175: MMP_RS00175 - tRNA-Ala, at 40,358 to 40,430
_RS00175
MMP_RS00180: MMP_RS00180 - 16S ribosomal RNA, at 40,485 to 41,951
_RS00180
MMP_RS00185: MMP_RS00185 - potassium channel protein, at 42,181 to 43,188
_RS00185
Position (kb) 40
41
42 Strain fitness (log2 ratio) -1
0
1
2 at 42.154 kb on + strand at 42.154 kb on + strand at 42.156 kb on + strand at 42.183 kb on + strand at 42.206 kb on + strand at 42.321 kb on - strand, within MMP_RS00185 at 42.324 kb on - strand, within MMP_RS00185 at 42.324 kb on - strand, within MMP_RS00185 at 42.325 kb on + strand, within MMP_RS00185 at 42.414 kb on + strand, within MMP_RS00185 at 42.419 kb on - strand, within MMP_RS00185 at 42.429 kb on - strand, within MMP_RS00185 at 42.429 kb on - strand, within MMP_RS00185 at 42.430 kb on + strand, within MMP_RS00185 at 42.505 kb on + strand, within MMP_RS00185 at 42.622 kb on + strand, within MMP_RS00185 at 42.625 kb on - strand, within MMP_RS00185 at 42.625 kb on - strand, within MMP_RS00185 at 42.626 kb on + strand, within MMP_RS00185 at 42.626 kb on + strand, within MMP_RS00185 at 42.626 kb on + strand, within MMP_RS00185 at 42.626 kb on + strand, within MMP_RS00185 at 42.631 kb on + strand, within MMP_RS00185 at 42.677 kb on + strand, within MMP_RS00185 at 42.688 kb on - strand, within MMP_RS00185 at 42.689 kb on + strand, within MMP_RS00185 at 42.691 kb on - strand, within MMP_RS00185 at 42.723 kb on - strand, within MMP_RS00185 at 42.723 kb on - strand, within MMP_RS00185 at 42.724 kb on + strand, within MMP_RS00185 at 42.726 kb on + strand, within MMP_RS00185 at 42.775 kb on + strand, within MMP_RS00185 at 42.823 kb on - strand, within MMP_RS00185 at 42.924 kb on + strand, within MMP_RS00185
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 10mM L-Aspartic Acid remove 42,154 + +0.4 42,154 + -1.2 42,156 + +0.6 42,183 + -0.3 42,206 + +0.5 42,321 - MMP_RS00185 0.14 +1.4 42,324 - MMP_RS00185 0.14 +1.6 42,324 - MMP_RS00185 0.14 +0.8 42,325 + MMP_RS00185 0.14 +1.0 42,414 + MMP_RS00185 0.23 +1.6 42,419 - MMP_RS00185 0.24 +1.0 42,429 - MMP_RS00185 0.25 +0.2 42,429 - MMP_RS00185 0.25 +0.5 42,430 + MMP_RS00185 0.25 +1.0 42,505 + MMP_RS00185 0.32 +1.0 42,622 + MMP_RS00185 0.44 +1.6 42,625 - MMP_RS00185 0.44 +0.4 42,625 - MMP_RS00185 0.44 +1.3 42,626 + MMP_RS00185 0.44 +1.5 42,626 + MMP_RS00185 0.44 +1.3 42,626 + MMP_RS00185 0.44 +2.0 42,626 + MMP_RS00185 0.44 +1.1 42,631 + MMP_RS00185 0.45 +0.3 42,677 + MMP_RS00185 0.49 +0.9 42,688 - MMP_RS00185 0.50 +1.7 42,689 + MMP_RS00185 0.50 +1.5 42,691 - MMP_RS00185 0.51 +2.0 42,723 - MMP_RS00185 0.54 +0.6 42,723 - MMP_RS00185 0.54 +1.4 42,724 + MMP_RS00185 0.54 +1.1 42,726 + MMP_RS00185 0.54 +1.2 42,775 + MMP_RS00185 0.59 +1.9 42,823 - MMP_RS00185 0.64 -0.2 42,924 + MMP_RS00185 0.74 +1.5
Or see this region's nucleotide sequence