Experiment: Benzalkonium Chloride 0.006ng/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27430 and BWI76_RS27435 are separated by 4 nucleotides BWI76_RS27435 and BWI76_RS27440 are separated by 2 nucleotides BWI76_RS27440 and BWI76_RS27445 are separated by 53 nucleotides
BWI76_RS27430: BWI76_RS27430 - (p)ppGpp synthetase, at 5,689,947 to 5,692,067
_RS27430
BWI76_RS27435: BWI76_RS27435 - tRNA (guanosine(18)-2'-O)-methyltransferase TrmH, at 5,692,072 to 5,692,761
_RS27435
BWI76_RS27440: BWI76_RS27440 - DNA helicase RecG, at 5,692,764 to 5,694,845
_RS27440
BWI76_RS27445: BWI76_RS27445 - fructose-bisphosphatase class II, at 5,694,899 to 5,695,909
_RS27445
Position (kb) 5692
5693
5694
5695 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5691.896 kb on + strand at 5692.004 kb on - strand at 5692.139 kb on + strand at 5692.287 kb on + strand, within BWI76_RS27435 at 5692.295 kb on - strand, within BWI76_RS27435 at 5692.295 kb on - strand, within BWI76_RS27435 at 5692.333 kb on + strand, within BWI76_RS27435 at 5692.333 kb on + strand, within BWI76_RS27435 at 5692.420 kb on - strand, within BWI76_RS27435 at 5692.471 kb on + strand, within BWI76_RS27435 at 5692.545 kb on + strand, within BWI76_RS27435 at 5692.553 kb on - strand, within BWI76_RS27435 at 5692.605 kb on + strand, within BWI76_RS27435 at 5692.678 kb on + strand, within BWI76_RS27435 at 5692.868 kb on - strand at 5693.250 kb on - strand, within BWI76_RS27440 at 5693.383 kb on + strand, within BWI76_RS27440 at 5693.391 kb on - strand, within BWI76_RS27440 at 5693.506 kb on + strand, within BWI76_RS27440 at 5693.797 kb on + strand, within BWI76_RS27440 at 5694.031 kb on + strand, within BWI76_RS27440 at 5694.301 kb on - strand, within BWI76_RS27440 at 5694.338 kb on - strand, within BWI76_RS27440 at 5694.430 kb on + strand, within BWI76_RS27440 at 5695.104 kb on - strand, within BWI76_RS27445 at 5695.475 kb on + strand, within BWI76_RS27445 at 5695.553 kb on + strand, within BWI76_RS27445 at 5695.771 kb on + strand, within BWI76_RS27445
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.006ng/ml remove 5,691,896 + -0.2 5,692,004 - -0.9 5,692,139 + -0.3 5,692,287 + BWI76_RS27435 0.31 -0.4 5,692,295 - BWI76_RS27435 0.32 -0.9 5,692,295 - BWI76_RS27435 0.32 +2.0 5,692,333 + BWI76_RS27435 0.38 -2.8 5,692,333 + BWI76_RS27435 0.38 -0.3 5,692,420 - BWI76_RS27435 0.50 -1.4 5,692,471 + BWI76_RS27435 0.58 +0.3 5,692,545 + BWI76_RS27435 0.69 -0.2 5,692,553 - BWI76_RS27435 0.70 -0.9 5,692,605 + BWI76_RS27435 0.77 -0.7 5,692,678 + BWI76_RS27435 0.88 -0.5 5,692,868 - -1.1 5,693,250 - BWI76_RS27440 0.23 -1.4 5,693,383 + BWI76_RS27440 0.30 -1.6 5,693,391 - BWI76_RS27440 0.30 -2.0 5,693,506 + BWI76_RS27440 0.36 -1.4 5,693,797 + BWI76_RS27440 0.50 -0.9 5,694,031 + BWI76_RS27440 0.61 +0.4 5,694,301 - BWI76_RS27440 0.74 -0.9 5,694,338 - BWI76_RS27440 0.76 +0.5 5,694,430 + BWI76_RS27440 0.80 -1.6 5,695,104 - BWI76_RS27445 0.20 +0.1 5,695,475 + BWI76_RS27445 0.57 -0.2 5,695,553 + BWI76_RS27445 0.65 -0.2 5,695,771 + BWI76_RS27445 0.86 +0.1
Or see this region's nucleotide sequence