Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23670

Experiment: Benzalkonium Chloride 0.006ng/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS23665 and BWI76_RS23670 are separated by 363 nucleotidesBWI76_RS23670 and BWI76_RS23675 are separated by 109 nucleotidesBWI76_RS23675 and BWI76_RS23680 are separated by 11 nucleotides BWI76_RS23665: BWI76_RS23665 - 2-deoxyribose-5-phosphate aldolase, at 4,939,468 to 4,940,217 _RS23665 BWI76_RS23670: BWI76_RS23670 - alkaline phosphatase, at 4,940,581 to 4,941,381 _RS23670 BWI76_RS23675: BWI76_RS23675 - allulose-6-phosphate 3-epimerase, at 4,941,491 to 4,942,180 _RS23675 BWI76_RS23680: BWI76_RS23680 - ribokinase, at 4,942,192 to 4,943,133 _RS23680 Position (kb) 4940 4941 4942Strain fitness (log2 ratio) -2 -1 0 1 2at 4939.828 kb on + strand, within BWI76_RS23665at 4939.857 kb on - strand, within BWI76_RS23665at 4939.879 kb on + strand, within BWI76_RS23665at 4940.000 kb on + strand, within BWI76_RS23665at 4940.042 kb on + strand, within BWI76_RS23665at 4940.088 kb on + strand, within BWI76_RS23665at 4940.093 kb on + strand, within BWI76_RS23665at 4940.133 kb on - strand, within BWI76_RS23665at 4940.133 kb on - strand, within BWI76_RS23665at 4940.331 kb on - strandat 4940.466 kb on - strandat 4940.473 kb on + strandat 4940.566 kb on + strandat 4940.566 kb on + strandat 4940.571 kb on + strandat 4940.576 kb on + strandat 4940.579 kb on - strandat 4940.623 kb on + strandat 4941.022 kb on - strand, within BWI76_RS23670at 4941.207 kb on - strand, within BWI76_RS23670at 4941.266 kb on + strand, within BWI76_RS23670at 4941.297 kb on + strand, within BWI76_RS23670at 4941.343 kb on + strandat 4941.644 kb on - strand, within BWI76_RS23675at 4941.832 kb on + strand, within BWI76_RS23675at 4941.851 kb on + strand, within BWI76_RS23675at 4941.860 kb on + strand, within BWI76_RS23675at 4941.870 kb on + strand, within BWI76_RS23675at 4941.878 kb on - strand, within BWI76_RS23675at 4941.973 kb on + strand, within BWI76_RS23675at 4942.073 kb on - strand, within BWI76_RS23675at 4942.074 kb on - strand, within BWI76_RS23675at 4942.123 kb on - strandat 4942.162 kb on - strandat 4942.239 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.006ng/ml
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4,939,828 + BWI76_RS23665 0.48 +0.1
4,939,857 - BWI76_RS23665 0.52 +0.6
4,939,879 + BWI76_RS23665 0.55 +0.3
4,940,000 + BWI76_RS23665 0.71 +0.1
4,940,042 + BWI76_RS23665 0.77 +0.0
4,940,088 + BWI76_RS23665 0.83 +0.1
4,940,093 + BWI76_RS23665 0.83 +0.4
4,940,133 - BWI76_RS23665 0.89 -0.3
4,940,133 - BWI76_RS23665 0.89 +0.4
4,940,331 - -0.5
4,940,466 - -0.2
4,940,473 + -0.1
4,940,566 + -2.1
4,940,566 + -0.0
4,940,571 + +0.4
4,940,576 + -0.1
4,940,579 - +0.5
4,940,623 + +0.0
4,941,022 - BWI76_RS23670 0.55 +1.3
4,941,207 - BWI76_RS23670 0.78 -0.0
4,941,266 + BWI76_RS23670 0.86 +1.8
4,941,297 + BWI76_RS23670 0.89 +0.4
4,941,343 + +0.5
4,941,644 - BWI76_RS23675 0.22 +0.5
4,941,832 + BWI76_RS23675 0.49 -0.3
4,941,851 + BWI76_RS23675 0.52 -0.3
4,941,860 + BWI76_RS23675 0.53 +1.4
4,941,870 + BWI76_RS23675 0.55 +0.1
4,941,878 - BWI76_RS23675 0.56 +0.3
4,941,973 + BWI76_RS23675 0.70 +0.2
4,942,073 - BWI76_RS23675 0.84 +0.0
4,942,074 - BWI76_RS23675 0.84 -0.3
4,942,123 - +0.2
4,942,162 - -0.3
4,942,239 + +0.9

Or see this region's nucleotide sequence