Experiment: Benzalkonium Chloride 0.006ng/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21490 and BWI76_RS21495 are separated by 11 nucleotides BWI76_RS21495 and BWI76_RS21500 are separated by 5 nucleotides
BWI76_RS21490: BWI76_RS21490 - GGDEF domain-containing protein, at 4,501,737 to 4,502,960
_RS21490
BWI76_RS21495: BWI76_RS21495 - outer membrane lipoprotein, at 4,502,972 to 4,503,454
_RS21495
BWI76_RS21500: BWI76_RS21500 - membrane protein, at 4,503,460 to 4,504,830
_RS21500
Position (kb)
4502
4503
4504 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4502.108 kb on + strand, within BWI76_RS21490 at 4502.277 kb on - strand, within BWI76_RS21490 at 4502.303 kb on - strand, within BWI76_RS21490 at 4502.466 kb on + strand, within BWI76_RS21490 at 4502.490 kb on + strand, within BWI76_RS21490 at 4502.504 kb on + strand, within BWI76_RS21490 at 4502.512 kb on - strand, within BWI76_RS21490 at 4502.543 kb on + strand, within BWI76_RS21490 at 4502.567 kb on - strand, within BWI76_RS21490 at 4502.569 kb on + strand, within BWI76_RS21490 at 4502.599 kb on + strand, within BWI76_RS21490 at 4502.600 kb on + strand, within BWI76_RS21490 at 4502.608 kb on - strand, within BWI76_RS21490 at 4502.701 kb on - strand, within BWI76_RS21490 at 4502.758 kb on - strand, within BWI76_RS21490 at 4502.763 kb on + strand, within BWI76_RS21490 at 4502.856 kb on - strand at 4502.859 kb on + strand at 4502.859 kb on + strand at 4502.859 kb on + strand at 4502.859 kb on + strand at 4502.867 kb on - strand at 4502.867 kb on - strand at 4502.867 kb on - strand at 4502.871 kb on + strand at 4502.879 kb on - strand at 4502.879 kb on - strand at 4502.884 kb on + strand at 4503.004 kb on - strand at 4503.089 kb on + strand, within BWI76_RS21495 at 4503.092 kb on - strand, within BWI76_RS21495 at 4503.092 kb on - strand, within BWI76_RS21495 at 4503.092 kb on - strand, within BWI76_RS21495 at 4503.092 kb on - strand, within BWI76_RS21495 at 4503.097 kb on - strand at 4503.195 kb on + strand, within BWI76_RS21495 at 4503.203 kb on - strand, within BWI76_RS21495 at 4503.208 kb on - strand at 4503.224 kb on - strand, within BWI76_RS21495 at 4503.224 kb on - strand, within BWI76_RS21495 at 4503.224 kb on - strand, within BWI76_RS21495 at 4503.226 kb on + strand, within BWI76_RS21495 at 4503.240 kb on - strand, within BWI76_RS21495 at 4503.613 kb on - strand, within BWI76_RS21500 at 4503.647 kb on + strand, within BWI76_RS21500 at 4503.891 kb on + strand, within BWI76_RS21500 at 4504.376 kb on + strand, within BWI76_RS21500
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.006ng/ml remove 4,502,108 + BWI76_RS21490 0.30 -1.9 4,502,277 - BWI76_RS21490 0.44 -1.0 4,502,303 - BWI76_RS21490 0.46 -0.8 4,502,466 + BWI76_RS21490 0.60 -1.0 4,502,490 + BWI76_RS21490 0.62 -0.6 4,502,504 + BWI76_RS21490 0.63 -0.6 4,502,512 - BWI76_RS21490 0.63 -0.8 4,502,543 + BWI76_RS21490 0.66 -2.9 4,502,567 - BWI76_RS21490 0.68 -0.8 4,502,569 + BWI76_RS21490 0.68 -0.2 4,502,599 + BWI76_RS21490 0.70 -0.5 4,502,600 + BWI76_RS21490 0.71 -0.5 4,502,608 - BWI76_RS21490 0.71 -1.3 4,502,701 - BWI76_RS21490 0.79 -0.1 4,502,758 - BWI76_RS21490 0.83 -0.9 4,502,763 + BWI76_RS21490 0.84 +0.1 4,502,856 - -0.1 4,502,859 + -1.0 4,502,859 + +0.1 4,502,859 + -1.5 4,502,859 + -1.2 4,502,867 - -0.6 4,502,867 - -2.0 4,502,867 - -0.5 4,502,871 + -0.1 4,502,879 - -0.7 4,502,879 - -0.8 4,502,884 + -1.0 4,503,004 - -1.1 4,503,089 + BWI76_RS21495 0.24 -0.5 4,503,092 - BWI76_RS21495 0.25 -0.4 4,503,092 - BWI76_RS21495 0.25 -0.7 4,503,092 - BWI76_RS21495 0.25 -0.4 4,503,092 - BWI76_RS21495 0.25 -1.5 4,503,097 - -0.1 4,503,195 + BWI76_RS21495 0.46 -0.8 4,503,203 - BWI76_RS21495 0.48 -0.1 4,503,208 - -2.1 4,503,224 - BWI76_RS21495 0.52 -1.1 4,503,224 - BWI76_RS21495 0.52 -1.0 4,503,224 - BWI76_RS21495 0.52 -0.3 4,503,226 + BWI76_RS21495 0.53 -0.4 4,503,240 - BWI76_RS21495 0.55 -0.9 4,503,613 - BWI76_RS21500 0.11 -1.0 4,503,647 + BWI76_RS21500 0.14 -1.7 4,503,891 + BWI76_RS21500 0.31 -0.8 4,504,376 + BWI76_RS21500 0.67 +1.3
Or see this region's nucleotide sequence