Experiment: Benzalkonium Chloride 0.006ng/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21440 and BWI76_RS21445 are separated by 127 nucleotides BWI76_RS21445 and BWI76_RS21450 overlap by 4 nucleotides
BWI76_RS21440: BWI76_RS21440 - ATP-dependent chaperone ClpB, at 4,490,443 to 4,493,016
_RS21440
BWI76_RS21445: BWI76_RS21445 - hypothetical protein, at 4,493,144 to 4,493,875
_RS21445
BWI76_RS21450: BWI76_RS21450 - 23S rRNA pseudouridine(1911/1915/1917) synthase, at 4,493,872 to 4,494,852
_RS21450
Position (kb)
4493
4494 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4492.194 kb on + strand, within BWI76_RS21440 at 4492.326 kb on - strand, within BWI76_RS21440 at 4492.487 kb on + strand, within BWI76_RS21440 at 4492.487 kb on + strand, within BWI76_RS21440 at 4492.487 kb on + strand, within BWI76_RS21440 at 4492.487 kb on + strand, within BWI76_RS21440 at 4492.487 kb on + strand, within BWI76_RS21440 at 4492.495 kb on - strand, within BWI76_RS21440 at 4492.495 kb on - strand, within BWI76_RS21440 at 4492.495 kb on - strand, within BWI76_RS21440 at 4492.495 kb on - strand, within BWI76_RS21440 at 4492.495 kb on - strand, within BWI76_RS21440 at 4492.495 kb on - strand, within BWI76_RS21440 at 4492.495 kb on - strand, within BWI76_RS21440 at 4492.627 kb on - strand, within BWI76_RS21440 at 4492.740 kb on + strand, within BWI76_RS21440 at 4492.740 kb on + strand, within BWI76_RS21440 at 4492.748 kb on - strand, within BWI76_RS21440 at 4492.748 kb on - strand, within BWI76_RS21440 at 4492.748 kb on - strand, within BWI76_RS21440 at 4492.798 kb on - strand at 4492.798 kb on - strand at 4492.818 kb on - strand at 4492.920 kb on - strand at 4492.973 kb on - strand at 4492.985 kb on - strand at 4493.082 kb on + strand at 4493.090 kb on + strand at 4493.090 kb on + strand at 4493.098 kb on - strand at 4493.142 kb on + strand at 4493.156 kb on + strand at 4493.232 kb on - strand, within BWI76_RS21445 at 4493.386 kb on + strand, within BWI76_RS21445 at 4493.413 kb on + strand, within BWI76_RS21445 at 4494.068 kb on + strand, within BWI76_RS21450 at 4494.244 kb on + strand, within BWI76_RS21450 at 4494.284 kb on - strand, within BWI76_RS21450 at 4494.452 kb on + strand, within BWI76_RS21450 at 4494.835 kb on - strand at 4494.840 kb on - strand at 4494.842 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.006ng/ml remove 4,492,194 + BWI76_RS21440 0.68 +0.5 4,492,326 - BWI76_RS21440 0.73 +0.3 4,492,487 + BWI76_RS21440 0.79 +1.3 4,492,487 + BWI76_RS21440 0.79 -1.1 4,492,487 + BWI76_RS21440 0.79 +0.5 4,492,487 + BWI76_RS21440 0.79 -0.2 4,492,487 + BWI76_RS21440 0.79 +0.2 4,492,495 - BWI76_RS21440 0.80 +0.0 4,492,495 - BWI76_RS21440 0.80 +0.2 4,492,495 - BWI76_RS21440 0.80 -0.3 4,492,495 - BWI76_RS21440 0.80 +1.5 4,492,495 - BWI76_RS21440 0.80 -0.2 4,492,495 - BWI76_RS21440 0.80 +0.5 4,492,495 - BWI76_RS21440 0.80 +0.0 4,492,627 - BWI76_RS21440 0.85 -0.1 4,492,740 + BWI76_RS21440 0.89 +1.9 4,492,740 + BWI76_RS21440 0.89 +0.0 4,492,748 - BWI76_RS21440 0.90 +0.6 4,492,748 - BWI76_RS21440 0.90 +0.3 4,492,748 - BWI76_RS21440 0.90 +0.4 4,492,798 - +0.3 4,492,798 - -0.8 4,492,818 - +0.2 4,492,920 - -0.1 4,492,973 - -0.4 4,492,985 - +0.7 4,493,082 + -0.6 4,493,090 + -0.0 4,493,090 + -0.1 4,493,098 - -0.9 4,493,142 + -0.1 4,493,156 + -0.9 4,493,232 - BWI76_RS21445 0.12 -1.4 4,493,386 + BWI76_RS21445 0.33 -1.2 4,493,413 + BWI76_RS21445 0.37 -0.0 4,494,068 + BWI76_RS21450 0.20 -0.1 4,494,244 + BWI76_RS21450 0.38 -0.5 4,494,284 - BWI76_RS21450 0.42 -2.1 4,494,452 + BWI76_RS21450 0.59 -1.3 4,494,835 - -0.8 4,494,840 - -1.2 4,494,842 - -0.5
Or see this region's nucleotide sequence