Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07995

Experiment: Benzalkonium Chloride 0.006ng/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS07990 and BWI76_RS07995 are separated by 127 nucleotidesBWI76_RS07995 and BWI76_RS08000 are separated by 222 nucleotides BWI76_RS07990: BWI76_RS07990 - carbon-nitrogen hydrolase, at 1,694,881 to 1,695,669 _RS07990 BWI76_RS07995: BWI76_RS07995 - twin-arginine translocase subunit TatA, at 1,695,797 to 1,696,000 _RS07995 BWI76_RS08000: BWI76_RS08000 - lipoyl synthase, at 1,696,223 to 1,697,188 _RS08000 Position (kb) 1695 1696 1697Strain fitness (log2 ratio) -1 0 1at 1695.882 kb on + strand, within BWI76_RS07995at 1695.890 kb on - strand, within BWI76_RS07995at 1696.166 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.006ng/ml
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1,695,882 + BWI76_RS07995 0.42 +0.2
1,695,890 - BWI76_RS07995 0.46 -1.0
1,696,166 - -0.7

Or see this region's nucleotide sequence