Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08490

Experiment: Benzalkonium Chloride 0.004mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS08485 and BWI76_RS08490 overlap by 1 nucleotides BWI76_RS08485: BWI76_RS08485 - glutamate mutase, at 1,797,042 to 1,798,430 _RS08485 BWI76_RS08490: BWI76_RS08490 - methylaspartate mutase, at 1,798,430 to 1,798,879 _RS08490 Position (kb) 1798 1799Strain fitness (log2 ratio) -2 -1 0 1 2at 1797.912 kb on + strand, within BWI76_RS08485at 1798.009 kb on - strand, within BWI76_RS08485at 1798.011 kb on + strand, within BWI76_RS08485at 1798.110 kb on - strand, within BWI76_RS08485at 1798.283 kb on + strand, within BWI76_RS08485at 1798.345 kb on - strandat 1798.363 kb on + strandat 1798.363 kb on + strandat 1798.371 kb on - strandat 1798.435 kb on - strandat 1798.451 kb on + strandat 1798.456 kb on + strandat 1798.612 kb on + strand, within BWI76_RS08490at 1798.619 kb on - strand, within BWI76_RS08490at 1798.629 kb on - strand, within BWI76_RS08490at 1798.660 kb on + strand, within BWI76_RS08490at 1798.660 kb on + strand, within BWI76_RS08490at 1798.660 kb on + strand, within BWI76_RS08490at 1798.660 kb on + strand, within BWI76_RS08490at 1798.660 kb on + strand, within BWI76_RS08490at 1798.660 kb on + strand, within BWI76_RS08490at 1798.660 kb on + strand, within BWI76_RS08490at 1798.660 kb on + strand, within BWI76_RS08490at 1798.660 kb on + strand, within BWI76_RS08490at 1798.668 kb on - strand, within BWI76_RS08490at 1798.668 kb on - strand, within BWI76_RS08490at 1798.668 kb on - strand, within BWI76_RS08490at 1798.668 kb on - strand, within BWI76_RS08490at 1798.668 kb on - strand, within BWI76_RS08490at 1798.668 kb on - strand, within BWI76_RS08490at 1798.668 kb on - strand, within BWI76_RS08490at 1798.693 kb on - strand, within BWI76_RS08490at 1798.705 kb on - strand, within BWI76_RS08490at 1798.710 kb on - strand, within BWI76_RS08490at 1798.747 kb on - strand, within BWI76_RS08490at 1798.771 kb on + strand, within BWI76_RS08490at 1798.773 kb on - strand, within BWI76_RS08490at 1798.795 kb on - strand, within BWI76_RS08490at 1798.816 kb on - strand, within BWI76_RS08490at 1798.820 kb on + strand, within BWI76_RS08490at 1798.821 kb on - strand, within BWI76_RS08490at 1798.828 kb on + strand, within BWI76_RS08490at 1798.830 kb on + strand, within BWI76_RS08490at 1798.836 kb on - strandat 1798.836 kb on - strandat 1798.838 kb on - strandat 1798.838 kb on - strandat 1798.845 kb on - strandat 1798.888 kb on - strandat 1798.888 kb on - strandat 1798.890 kb on + strandat 1798.895 kb on - strandat 1798.898 kb on - strandat 1798.898 kb on - strandat 1798.937 kb on + strandat 1798.953 kb on + strandat 1798.961 kb on - strandat 1798.963 kb on + strandat 1798.963 kb on + strandat 1798.971 kb on - strandat 1798.971 kb on - strandat 1799.341 kb on + strandat 1799.341 kb on + strandat 1799.341 kb on + strandat 1799.341 kb on + strandat 1799.341 kb on + strandat 1799.341 kb on + strandat 1799.356 kb on + strandat 1799.363 kb on - strandat 1799.364 kb on - strandat 1799.364 kb on - strandat 1799.378 kb on - strandat 1799.385 kb on + strandat 1799.385 kb on + strandat 1799.391 kb on - strandat 1799.395 kb on - strandat 1799.402 kb on + strandat 1799.403 kb on - strandat 1799.444 kb on + strandat 1799.452 kb on - strandat 1799.477 kb on + strandat 1799.577 kb on + strandat 1799.599 kb on + strandat 1799.607 kb on - strandat 1799.607 kb on - strandat 1799.693 kb on + strandat 1799.693 kb on + strandat 1799.693 kb on + strandat 1799.693 kb on + strandat 1799.693 kb on + strandat 1799.693 kb on + strandat 1799.693 kb on + strandat 1799.693 kb on + strandat 1799.693 kb on + strandat 1799.701 kb on - strandat 1799.701 kb on - strandat 1799.701 kb on - strandat 1799.701 kb on - strandat 1799.701 kb on - strandat 1799.701 kb on - strandat 1799.701 kb on - strandat 1799.701 kb on - strandat 1799.701 kb on - strandat 1799.701 kb on - strandat 1799.701 kb on - strandat 1799.708 kb on - strandat 1799.708 kb on - strandat 1799.714 kb on - strandat 1799.715 kb on + strandat 1799.850 kb on + strandat 1799.850 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.004mg/ml
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1,797,912 + BWI76_RS08485 0.63 -0.3
1,798,009 - BWI76_RS08485 0.70 +0.0
1,798,011 + BWI76_RS08485 0.70 -1.0
1,798,110 - BWI76_RS08485 0.77 -0.0
1,798,283 + BWI76_RS08485 0.89 +0.2
1,798,345 - -0.5
1,798,363 + -0.4
1,798,363 + -0.6
1,798,371 - -0.1
1,798,435 - -0.7
1,798,451 + +0.0
1,798,456 + -0.1
1,798,612 + BWI76_RS08490 0.40 -0.1
1,798,619 - BWI76_RS08490 0.42 +1.4
1,798,629 - BWI76_RS08490 0.44 +0.1
1,798,660 + BWI76_RS08490 0.51 +0.5
1,798,660 + BWI76_RS08490 0.51 -2.6
1,798,660 + BWI76_RS08490 0.51 +0.5
1,798,660 + BWI76_RS08490 0.51 +0.4
1,798,660 + BWI76_RS08490 0.51 +0.0
1,798,660 + BWI76_RS08490 0.51 -0.4
1,798,660 + BWI76_RS08490 0.51 +0.2
1,798,660 + BWI76_RS08490 0.51 +1.0
1,798,660 + BWI76_RS08490 0.51 -0.4
1,798,668 - BWI76_RS08490 0.53 +0.2
1,798,668 - BWI76_RS08490 0.53 -0.1
1,798,668 - BWI76_RS08490 0.53 -0.7
1,798,668 - BWI76_RS08490 0.53 -0.2
1,798,668 - BWI76_RS08490 0.53 -0.4
1,798,668 - BWI76_RS08490 0.53 +1.2
1,798,668 - BWI76_RS08490 0.53 +0.5
1,798,693 - BWI76_RS08490 0.58 +0.5
1,798,705 - BWI76_RS08490 0.61 +0.5
1,798,710 - BWI76_RS08490 0.62 -0.1
1,798,747 - BWI76_RS08490 0.70 -0.1
1,798,771 + BWI76_RS08490 0.76 +0.3
1,798,773 - BWI76_RS08490 0.76 -0.1
1,798,795 - BWI76_RS08490 0.81 -0.3
1,798,816 - BWI76_RS08490 0.86 +1.1
1,798,820 + BWI76_RS08490 0.87 -0.3
1,798,821 - BWI76_RS08490 0.87 -0.0
1,798,828 + BWI76_RS08490 0.88 -0.3
1,798,830 + BWI76_RS08490 0.89 -0.5
1,798,836 - +0.4
1,798,836 - -0.3
1,798,838 - +0.3
1,798,838 - -0.6
1,798,845 - -0.7
1,798,888 - -0.3
1,798,888 - +0.2
1,798,890 + +0.3
1,798,895 - +2.5
1,798,898 - +0.9
1,798,898 - +0.4
1,798,937 + +0.4
1,798,953 + -0.1
1,798,961 - -0.0
1,798,963 + -0.2
1,798,963 + -0.7
1,798,971 - +0.5
1,798,971 - -0.3
1,799,341 + -0.6
1,799,341 + +0.6
1,799,341 + +0.6
1,799,341 + -0.7
1,799,341 + +0.1
1,799,341 + +2.2
1,799,356 + +0.9
1,799,363 - +0.0
1,799,364 - +0.3
1,799,364 - +0.2
1,799,378 - +0.7
1,799,385 + -0.1
1,799,385 + +0.2
1,799,391 - +0.5
1,799,395 - +0.1
1,799,402 + +0.2
1,799,403 - -0.0
1,799,444 + +2.2
1,799,452 - +0.1
1,799,477 + -0.2
1,799,577 + +0.8
1,799,599 + -0.7
1,799,607 - +0.7
1,799,607 - +0.1
1,799,693 + +0.8
1,799,693 + -0.0
1,799,693 + +0.3
1,799,693 + +2.4
1,799,693 + -0.0
1,799,693 + +1.0
1,799,693 + +0.3
1,799,693 + -0.4
1,799,693 + -0.2
1,799,701 - -1.1
1,799,701 - -0.6
1,799,701 - -0.3
1,799,701 - +0.2
1,799,701 - -0.6
1,799,701 - -0.2
1,799,701 - -0.4
1,799,701 - -0.1
1,799,701 - -0.5
1,799,701 - +0.1
1,799,701 - +0.3
1,799,708 - -1.3
1,799,708 - +1.0
1,799,714 - -0.8
1,799,715 + -0.7
1,799,850 + -0.4
1,799,850 + -0.1

Or see this region's nucleotide sequence