Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS21150

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
4,837,766	+				+1.8
4,837,828	-		HSERO_RS21145	0.57	+0.8
4,837,852	+		HSERO_RS21145	0.59	+0.2
4,838,039	-		HSERO_RS21145	0.73	-0.2
4,838,039	-		HSERO_RS21145	0.73	-0.3
4,838,106	+		HSERO_RS21145	0.78	+2.7
4,838,172	+		HSERO_RS21145	0.83	+0.4
4,838,298	-				-0.5
4,838,387	+				-0.4
4,838,388	+				+0.8
4,838,594	+				-0.3
4,838,817	-		HSERO_RS21150	0.21	-2.4
4,839,049	-		HSERO_RS21150	0.56	-0.5
4,839,073	+		HSERO_RS21150	0.60	+1.4
4,839,148	-		HSERO_RS21150	0.72	-2.3
4,839,493	-		HSERO_RS21155	0.13	+2.1
4,839,539	+		HSERO_RS21155	0.16	-0.1
4,839,547	-		HSERO_RS21155	0.17	-1.3
4,839,594	-		HSERO_RS21155	0.21	-0.2
4,839,634	+		HSERO_RS21155	0.24	-1.0
4,839,674	-		HSERO_RS21155	0.27	-1.2
4,839,674	-		HSERO_RS21155	0.27	-0.7
4,839,713	-		HSERO_RS21155	0.30	+0.2
4,839,746	-				+0.8
4,839,825	+		HSERO_RS21155	0.39	-1.4
4,839,858	-		HSERO_RS21155	0.41	+1.7
4,839,888	-		HSERO_RS21155	0.44	+0.4
4,839,893	-		HSERO_RS21155	0.44	-0.2
4,840,043	+		HSERO_RS21155	0.56	-0.5
4,840,282	-		HSERO_RS21155	0.74	-0.9