Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS20235

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
4,642,767	+				-0.8
4,642,775	-				+2.2
4,643,627	-				-1.8
4,643,651	+				+0.5
4,643,657	-				+0.6
4,643,685	-				-1.3
4,643,822	+		HSERO_RS20235	0.24	+0.5
4,643,830	-		HSERO_RS20235	0.25	-0.4
4,644,411	-				+0.5
4,644,487	-				+1.9
4,644,898	-		HSERO_RS20240	0.34	+1.2
4,645,066	+		HSERO_RS20240	0.45	+1.8