Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS17105

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
3,915,496	-		HSERO_RS17090	0.34	+0.6
3,915,560	-		HSERO_RS17090	0.54	+0.6
3,915,633	+		HSERO_RS17090	0.77	-0.8
3,915,661	+		HSERO_RS17090	0.86	-0.3
3,915,661	+		HSERO_RS17090	0.86	-1.6
3,915,750	+		HSERO_RS17095	0.20	+0.7
3,916,067	+				-0.5
3,916,166	+				+0.8
3,916,176	+				-0.5
3,916,478	+				-0.4
3,916,726	-		HSERO_RS17105	0.33	-2.3
3,916,733	-		HSERO_RS17105	0.34	-0.4
3,917,247	+				+0.4
3,917,278	-				+0.3
3,917,494	+		HSERO_RS17110	0.48	-0.2
3,917,494	+		HSERO_RS17110	0.48	-0.9
3,917,548	+		HSERO_RS17110	0.60	-1.1
3,917,722	+				+1.1