Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS16035

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
3,660,621	-				-1.2
3,660,657	+				-1.6
3,660,996	-		HSERO_RS16030	0.69	+0.2
3,660,996	-		HSERO_RS16030	0.69	-0.6
3,660,998	+		HSERO_RS16030	0.69	+0.0
3,661,191	+				+2.4
3,662,057	+		HSERO_RS16035	0.58	+2.0
3,662,193	+		HSERO_RS16035	0.67	+2.0
3,662,193	+		HSERO_RS16035	0.67	-2.1
3,662,370	+		HSERO_RS16035	0.79	+0.2
3,662,572	-				+1.4
3,662,602	+				-0.2
3,662,646	-				+1.0
3,663,489	+		HSERO_RS16040	0.72	-0.8
3,663,601	-		HSERO_RS16040	0.84	-1.2
3,663,624	+		HSERO_RS16040	0.86	-1.9