Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS15575

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
3,558,513	+		HSERO_RS15570	0.32	+0.7
3,558,829	+		HSERO_RS15570	0.55	-0.2
3,559,103	-		HSERO_RS15570	0.76	+0.0
3,559,195	-		HSERO_RS15570	0.83	-0.9
3,559,236	-		HSERO_RS15570	0.86	-0.4
3,559,288	+		HSERO_RS15570	0.90	-2.4
3,559,464	-				-0.1
3,559,581	+		HSERO_RS15575	0.16	-0.6
3,560,235	-				+0.9
3,560,325	+		HSERO_RS15580	0.26	+0.9
3,560,555	+		HSERO_RS15580	0.88	-0.4
3,560,560	+		HSERO_RS15580	0.89	+0.2
3,560,560	+		HSERO_RS15580	0.89	+0.2
3,560,560	+		HSERO_RS15580	0.89	-1.2
3,560,582	-				+0.7
3,560,733	-		HSERO_RS15585	0.15	+0.4
3,560,831	+		HSERO_RS15585	0.42	-0.1
3,560,941	-		HSERO_RS15585	0.72	-1.0
3,560,949	+		HSERO_RS15585	0.74	+0.0
3,560,951	-		HSERO_RS15585	0.74	+0.8
3,560,957	-		HSERO_RS15585	0.76	-0.3
3,560,957	-		HSERO_RS15585	0.76	-0.8
3,560,964	+		HSERO_RS15585	0.78	-0.6
3,560,972	-		HSERO_RS15585	0.80	-0.1
3,561,003	-		HSERO_RS15585	0.89	-0.5