Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS15070

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
3,418,143	-		HSERO_RS15060	0.83	-0.3
3,418,292	+				-0.3
3,418,335	-				-0.1
3,418,431	-				+0.1
3,418,756	+		HSERO_RS15065	0.52	+0.0
3,418,791	-		HSERO_RS15065	0.57	+1.0
3,418,878	+		HSERO_RS15065	0.68	+0.7
3,419,038	-		HSERO_RS15065	0.90	-0.5
3,419,613	-		HSERO_RS15070	0.44	-1.3
3,420,242	+				-0.2
3,421,081	-				-0.6