Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS13410

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
3,052,913	+		HSERO_RS13405	0.35	-0.0
3,052,921	-		HSERO_RS13405	0.35	-0.3
3,053,159	+		HSERO_RS13405	0.55	+0.5
3,053,304	+		HSERO_RS13405	0.67	-0.5
3,053,313	+		HSERO_RS13405	0.67	-0.2
3,053,489	+		HSERO_RS13405	0.82	-1.1
3,053,574	+		HSERO_RS13405	0.89	-0.5
3,053,884	-		HSERO_RS13410	0.60	-1.6
3,053,917	+		HSERO_RS13410	0.78	-1.6
3,053,939	-				+0.4
3,054,210	+				+4.1
3,054,341	-				-0.2
3,054,506	+				-1.2
3,054,727	-		HSERO_RS13415	0.53	-0.5
3,054,731	+		HSERO_RS13415	0.54	+0.2
3,054,738	+		HSERO_RS13415	0.56	+0.4
3,054,781	-		HSERO_RS13415	0.65	+0.1
3,054,804	+				+2.1