Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS13340

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
3,039,812	-				-0.8
3,040,030	+		HSERO_RS13335	0.44	-1.3
3,040,163	-		HSERO_RS13335	0.64	+1.6
3,040,496	+				-0.6
3,040,595	+				+0.1
3,040,821	+		HSERO_RS13340	0.83	-0.9
3,040,835	-				-0.1
3,040,891	+		HSERO_RS13345	0.13	+0.3
3,041,384	+				+0.4
3,041,684	-		HSERO_RS13355	0.15	+0.3
3,041,798	+		HSERO_RS13355	0.22	-0.0